Home

Publications

Export 72 results:
Book Chapter
  1. [CAMA-11] S. Camarasu-Pop, T. Glatard, H. Benoit-Cattin, and D. Sarrut, "Enabling Grids for GATE Monte-Carlo Radiation Therapy Simulations with the GATE-Lab", Applications of Monte Carlo Method in Science and Engineering, 2011 .
  2. [GERM-09] C. Germain-Renaud, V. Breton, P. Clarysse, B. Delhay, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legré, J. Montagnat, J. M. Moureaux, et al., "Grid Analysis of Radiological Data", Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare: IGI, 2009.
  3. [GLAT-07] T. Glatard, G. Sipos, J. Montagnat, Z. Farkas, and P. Kacsuk, "Workflow Level Parametric Study Support by MOTEUR and the P-GRADE Portal", Workflows for e-Science: Springer, pp. 279–299, 2007 .
Journal Article
  1. [MA-13] J. Ma, W. Liu, and T. Glatard, "A classification of file placement and replication methods on grids", Future Generation Computer Systems, vol. 29, no. 6, pp. 1395–1406, 2013 .  Download: fgcs-2011.pdf (599.24 KB)
  2. [FENG-13] D. Feng, C. Germain-Renaud, and T. Glatard, "Efficient Distributed Monitoring with Active Collaborative Prediction", Future Generation Computer Systems, pp. to appear, 2013 .
  3. [CAMA-13] S. Camarasu-Pop, T. Glatard, R. Ferreira da Silva, P. Gueth, D. Sarrut, and H. Benoit-Cattin, "Monte-Carlo Simulation on Heterogeneous Distributed Systems: a Computing Framework with Parallel Merging and Checkpointing Strategies", Future Generation Computer Systems, vol. 29, no. 3, pp. 728--738, 03/2013 .
  4. [FERR-13] R. Ferreira da Silva, T. Glatard, and F. Desprez, "Self-healing of workflow activity incidents on distributed computing infrastructures", Future Generation Computer Systems, pp. to appear, 2013.
  5. [GLAT-13] T. Glatard, C. Lartizien, B. Gibaud, R. Ferreira da Silva, G. Forestier, F. Cervenansky, M. Alessandrini, H. Benoit-Cattin, O. Bernard, S. Camarasu-Pop, et al., "A Virtual Imaging Platform for multi-modality medical image simulation", IEEE Transactions on Medical Imaging, vol. 32, no. 1, pp. 110-118, 2013 .  Download: tmi-2012.pdf (487.25 KB)
  6. [GLAT-11] T. Glatard, and S. Camarasu-Pop, "A model of pilot-job resource provisioning on production grids", Parallel Computing, vol. 37, pp. 684-692, 2011 .  Download: parco10.pdf (531.99 KB)
  7. [CAMA-10] S. Camarasu-Pop, T. Glatard, J. T. Moscicki, H. Benoit-Cattin, and D. Sarrut, "Dynamic partitioning of GATE Monte-Carlo simulations on EGEE", Journal of Grid Computing, vol. 8, no. 2, pp. 241-259, mar, 2010 .
  8. [GLAT-10] T. Glatard, R. S. Soleman, D. J. Veltman, A. Nederveen, and S. Olabarriaga, "Large scale functional MRI study on a production grid", Future Gener Comp Systems, vol. 26, no. 4, pp. 685-692, 2010.  Download: fgcs.pdf (361.7 KB)
  9. [OLAB-10] S. Olabarriaga, T. Glatard, and P. T. de Boer, "A Virtual Laboratory for Medical Image Analysis", IEEE T Inf Technol B, vol. 14, no. 4, pp. 979-985, 2010.  Download: TITB-00320-2008-final.pdf.zip (4.51 MB)
  10. [LING-09a] D. Lingrand, T. Glatard, and J. Montagnat, "Modeling the latency on production grids with respect to the execution context", Parallel Computing, vol. 35, no. 10-11, pp. 493-511, oct, 2009.  Download: lingrand-glatard-etal_2009.pdf (1.13 MB)
  11. [GLAT-08i] T. Glatard, J. Montagnat, D. Lingrand, and X. Pennec, "Flexible and efficient workflow deployement of data-intensive applications on grids with MOTEUR", Journal of High Performance Computing and Applications, vol. 22, no. 3, pp. 347–360, 2008 .
  12. [GLAT-08j] T. Glatard, J. Montagnat, D. Emsellem, and D. Lingrand, "A Service-Oriented Architecture enabling dynamic services grouping for optimizing distributed workflows execution", Future Gener Comp Sy, vol. 24, no. 7, pp. 720–730, jul, 2008 .
  13. [MONT-08a] J. Montagnat, T. Glatard, I. Campos, F. Castejon, X. Pennec, T. Giuliano, V. Voznesensky, and C. Vuerli, "Workflow-based data parallel applications on the EGEE production grid infrastructure", Journal of Grid Computing, vol. 6, no. 4, pp. 369–383, dec, 2008 .
  14. [MONT-07] J. Montagnat, T. Glatard, and D. Lingrand, "Texture-based Medical Image Indexing and Retrieval on Grids", Medical Imaging Technology, vol. 25, no. 5, nov, 2007 .
  15. [GERM-05] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legre, C. Loomis, I. E. Magnin, J. Montagnat, et al., "Grid-enabling medical image analysis", J Clin Monit Comput, vol. 19, no. 4-5, pp. 339-349, 2005.
Conference Paper
  1. [FERR-13b] R. Ferreira da Silva, T. Glatard, and F. Desprez, "On-line, non-clairvoyant optimization of workflow activity granularity on grids", Euro-Par, Aachen, Germany, pp. to appear, 2013.
  2. [CAMA-13a] S. Camarasu-Pop, T. Glatard, and H. Benoit-Cattin, "Simulating Application Workflows and Services Deployed on the European Grid Infrastructure", CCGrid , Delft, The Netherlands, pp. to appear, 2013.
  3. [FERR-13a] R. Ferreira da Silva, T. Glatard, and F. Desprez, "Workflow fairness control on online and non-clairvoyant distributed computing platforms", Euro-Par, Aachen, Germany, pp. to appear, 2013.
  4. [FENG-12] D. Feng, C. Germain-Renaud, and T. Glatard, "Distributed Monitoring with Collaborative Prediction", 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing , Ottawa, Canada, pp. accepted, 2012.
  5. [GLAT-12] T. Glatard, A. Marion, H. Benoit-Cattin, S. Camarasu-Pop, P. Clarysse, R. Ferreira da Silva, G. Forestier, B. Gibaud, C. Lartizien, H. Liebgott, et al., "Multi-modality image simulation with the virtual imaging platform: Illustration on cardiac MRI and echography", IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, Spain, pp. 98-101, 2012 .  Download: isbi2012-vip.pdf (808.08 KB)
  6. [GIBA-12] B. Gibaud, G. Forestier, H. Benoit-Cattin, F. Cervenansky, P. Clarysse, D. Friboulet, A. Gaignard, P. Hugonnard, C. Lartizien, H. Liebgott, et al., "OntoVIP: an ontology for the annotation of object models used for medical image simulation", IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology (HISB), La Jolla, California, USA, pp. 110-119, 2012 .
  7. [FERR-12a] R. Ferreira da Silva, and T. Glatard, "A science-gateway workload archive to study pilot jobs, user activity, bag of tasks, task sub-steps, and workflow executions", CoreGRID/ERCIM Workshop on Grids, Clouds and P2P Computing - CGWS 2012, Rhodes Island, Greece, Springer Berlin Heidelberg, pp. 79-88, 08/2012 .  Download: 2012-cgws.pdf (1.09 MB)
  8. [FERR-12] R. Ferreira da Silva, T. Glatard, and F. Desprez, "Self-healing of operational workflow incidents on distributed computing infrastructures", 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing - CCGrid 2012, Ottawa, Canada, pp. 318-325, 05/2012 .  Download: ccgrid2012.pdf (435.3 KB)
  9. [MICH-12] F. Michel, J. Montagnat, and T. Glatard, "Technical support for Life Sciences communities on a production grid infrastructure", HealthGrid 2012, Amsterdam, The Netherlands, IOS Press, 2012 .
  10. [FRED-11] S. B. Fredj, T. Glatard, C. Casta, and P. Clarysse, "An exploration framework for segmentation parameter spaces", IEEE International Conference on Image Processing , Brussels, Belgium, 2011.  Download: icip11.pdf (346.24 KB)
  11. [FERR-11] R. Ferreira da Silva, S. Camarasu-Pop, B. Grenier, V. Hamar, D. Manset, J. Montagnat, J. Revillard, J. R. Balderrama, A. Tsaregorodtsev, and T. Glatard, "Multi-infrastructure workflow execution for medical simulation in the Virtual Imaging Platform", HealthGrid 2011, Bristol, UK, 2011.  Download: hg11-platform.pdf (856.36 KB)
  12. [MARI-11b] A. Marion, G. Forestier, H. Benoit-Cattin, S. Camarasu-Pop, P. Clarysse, R. Ferreira da Silva, B. Gibaud, T. Glatard, P. Hugonnard, C. Lartizien, et al., "Multi-modality medical image simulation of biological models with the Virtual Imaging Platform (VIP)", The 24th International Symposium on Computer-Based Medical Systems (CBMS 2011), Bristol, UK, pp. 1-6, 2011 .  Download: cbms2011-multimod.pdf (726.29 KB)
  13. [GUET-11b] P. Gueth, S. Camarasu-Pop, T. Glatard, L. Grevillot, and D. Sarrut, "PBS proton treatment plan simulation with the GATE-Lab", 50th International PTCOG meeting (Particle Therapy Co-Operative Group), Philadelphia, US, 2011 .
  14. [FORE-11] G. Forestier, A. Marion, H. Benoit-Cattin, P. Clarysse, D. Friboulet, T. Glatard, P. Hugonnard, C. Lartizien, H. Liebgott, J. Tabary, et al., "Sharing object models for multi-modality medical image simulation: a semantic approach", The 24th International Symposium on Computer-Based Medical Systems (CBMS 2011), Bristol, UK, pp. 1-6, 2011 .  Download: cbms2011.pdf (226.44 KB)
  15. [LI-10] T. Li, S. Camarasu-Pop, T. Glatard, T. Grenier, and H. Benoit-Cattin, "Optimization of Mean-Shift scale parameters on the EGEE grid", Studies in health technology and informatics, Proceedings of Healthgrid 2010, vol. 159, pp. 203-214, 2010 .  Download: hg10.pdf (1.03 MB)
  16. [TAN-10] W. - J. Tan, C. T. M. Ching, S. Camarasu-Pop, P. Calvat, and T. Glatard, "Two experiments with application-level quality of service on the EGEE grid", Proceeding of the 2nd workshop on Grids meets autonomic computing, New York, NY, USA, ACM, pp. 11–20, 2010 .
  17. [MONT-10] J. Montagnat, T. Glatard, D. Reimert, K. Maheshwari, E. Caron, and F. Desprez, "Workflow-based comparison of two Distributed Computing Infrastructures", 5th Workshop on Workflows in Support of Large-Scale Science (WORKS10), New-Orleans, LA, 10/2010.  Download: works10-revision.pdf (345.92 KB)
  18. [GLAT-09a] T. Glatard, X. Zhou, S. Camarasu-Pop, O. Smirnova, and H. Muller, "A comparison between ARC and gLite for medical image processing on Grids", 2nd workshop on Medical imaging on GRID, HPC and GPU infrastructures: achievements and perspectives (MICCAI-Grid), London, UK, sep, 2009.  Download: MICCAI_ARC_gLite-final.pdf (102.37 KB)
  19. [MONT-09] J. Montagnat, B. Isnard, T. Glatard, K. Maheshwari, and M. Blay-Fornarino, "A data-driven workflow language for grids based on array programming principles", Workshop on Workflows in Support of Large-Scale Science(WORKS'09), nov, 2009 .
  20. [GLAT-09] T. Glatard, and S. Camarasu-Pop, "Modelling pilot-job applications on production grids", 7th international workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms (Heteropar 09), Delft, The Netherlands, aug, 2009.  Download: heteropar09-glatard-camarasu-final.pdf (1.53 MB)
  21. [OLAB-09] S. Olabarriaga, T. Glatard, A. Hoheisel, A. Nederveen, and D. Krefting, "Crossing HealthGrid Borders: Early Results in Medical Imaging", HealthGrid'09, Berlin, jun, 2009.
  22. [LING-09] D. Lingrand, J. Montagnat, and T. Glatard, "Modeling user submission strategies on production grids", International Symposium on High Performance Distributed Computing (HPDC'09), Munchen, Germany, jun, 2009.  Download: lingrand-montagnat-etal_2009.pdf (374.77 KB)
  23. [MAHE-09] K. Maheshwari, T. Glatard, J. Schaerer, B. Delhay, S. Camarasu-Pop, P. Clarysse, and J. Montagnat, "Towards Production-level Cardiac Image Analysis with Grids", HealthGrid'09, Berlin, 2009.  Download: healthgrid09.pdf (813.4 KB)
  24. [GLAT-08e] T. Glatard, J. Montagnat, and X. Pennec, "A framework for evaluating the impact of compression on registration algorithms without gold standard", International Conference on Image Processing (ICIP'08), San Diego, California, USA, pp. 2912-2915, oct, 2008 .
  25. [GLAT-08d] T. Glatard, and S. Olabarriaga, "From gridified scripts to workflows: the FSL Feat case", MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, pp. 33–42, sep, 2008 .
  26. [GLAT-08f] T. Glatard, and S. Olabarriaga, "User friendly management of workflow results: from provenance information to grid logical file names", 4th IEEE International Conference on e-Science (eScience'08), Indianapolis, USA, 2008 .
  27. [GLAT-08b] T. Glatard, J. Montagnat, and X. Pennec, "A probabilistic model to analyse workflow performance on production grids", IEEE International Symposium on Cluster Computing and the Grid (CCGrid'08), Lyon, France, pp. 510–517, may, 2008 .
  28. [LING-08] D. Lingrand, J. Montagnat, and T. Glatard, "Estimating the execution context for refining submission strategies on production grids", Assessing Models of Networks and Distributed Computing Platforms (ASSESS / ModernBio) (CCGrid'08), Lyon, France, IEEE, pp. 753–758, may, 2008 .
  29. [OLAB-08] S. Olabarriaga, T. Glatard, K. Boulebiar, and P. T. de Boer, "From 'low-hanging' to 'user-ready': initial steps into a healthgrid", HealthGrid'08, Chicago, USA, pp. 70-79, jun, 2008 .
  30. [GLAT-08c] T. Glatard, and J. Montagnat, "Implementation of Turing machines with the Scufl data-flow language", 3rd International Workshop on Workflow Systems in e-Science (WSES'08), Lyon, France, may, 2008 .
  31. [SOLE-08e] R. S. Soleman, T. Glatard, D. J. Veltman, A. Nederveen, and S. Olabarriaga, "Large scale fMRI parameter study on a production grid", MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, pp. 65–74, sep, 2008 .
  32. [GLAT-08a] T. Glatard, K. Boulebiar, and S. Olabarriaga, "Workflow integration in VL-e medical", 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS'08), Jyväskylä, Finland, pp. 144-146, jun, 2008 .
  33. [GLAT-07a] T. Glatard, D. Lingrand, J. Montagnat, and M. Riveill, "Impact of the execution context on Grid job performances", International Workshop on Context-Awareness and Mobility in Grid Computing (WCAMG'07) (CCGrid'07), Rio de Janeiro, Brazil, IEEE, pp. 713–718, may, 2007 .
  34. [NEMO-07] C. Nemo, T. Glatard, M. Blay-Fornarino, and J. Montagnat, "Merging overlapping orchestrations: an application to the Bronze Standard medical application", International Conference on Services Computing (SCC 2007), Salt Lake City, Utah, USA, IEEE Computer Engineering, pp. 364–371, jul, 2007 .
  35. [GLAT-07b] T. Glatard, J. Montagnat, and X. Pennec, "Optimizing jobs timeouts on clusters and production grids", International Symposium on Cluster Computing and the Grid (CCGrid'07), Rio de Janeiro, Brazil, IEEE, pp. 100-107, may, 2007 .
  36. [MONT-06] J. Montagnat, T. Glatard, and D. Lingrand, "Data composition patterns in service-based workflows", Workshop on Workflows in Support of Large-Scale Science (WORKS'06), Paris, France, jun, 2006 .
  37. [GLAT-06d] T. Glatard, J. Montagnat, and X. Pennec, "Efficient services composition for grid-enabled data-intensive applications", IEEE International Symposium on High Performance Distributed Computing (HPDC'06), Paris, France, pp. 333–334, jun, 2006 .
  38. [GLAT-06b] T. Glatard, J. Montagnat, and X. Pennec, "An experimental comparison of Grid5000 clusters and the EGEE grid", Workshop on Experimental Grid testbeds for the assessment of large-scale distributed applications and tools (EXPGRID'06), Paris, France, jun, 2006 .
  39. [GLAT-06c] T. Glatard, D. Emsellem, and J. Montagnat, "Generic web service wrapper for efficient embedding of legacy codes in service-based workflows", Grid-Enabling Legacy Applications and Supporting End Users Workshop (GELA'06), Paris, France, pp. 44–53, jun, 2006 .
  40. [GLAT-06f] T. Glatard, J. Montagnat, and X. Pennec, "Medical image registration algorithms assessment: Bronze Standard application enactment on grids using the MOTEUR workflow engine", HealthGrid'06, Valencia, Spain, IOS Press, pp. 93–103, jun, 2006 .
  41. [GLAT-06a] T. Glatard, X. Pennec, and J. Montagnat, "Performance evaluation of grid-enabled registration algorithms using bronze-standards", Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, Springer, pp. 152–160, oct, 2006 .
  42. [GLAT-06e] T. Glatard, J. Montagnat, and X. Pennec, "Probabilistic and dynamic optimization of job partitioning on a grid infrastructure", 14th euromicro conference on Parallel, Distributed and network-based Processing (PDP06), Montbéliard-Sochaux, France, pp. 231–238, feb, 2006 .
  43. [GERM-05a] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legré, C. Loomis, J. Montagnat, J. M. Moureaux, et al., "Grid-enabling medical image analysis", Biogrid'05, proceedings of the IEEE/ACM International Symposium on Cluster Computing and the Grid, Cardiff, UK, 2005 .
  44. [GLAT-05a] T. Glatard, J. Montagnat, and X. Pennec, "Grid-enabled workflows for data intensive medical applications", 18th IEEE International Symposium on Computer-Based Medical Systems (CBMS), Dublin, Ireland, pp. 537-542, jun, 2005 .
  45. [GLAT-04] T. Glatard, J. Montagnat, and I. E. Magnin, "Texture based medical image indexing and retrieval: application to cardiac imaging", Proceedings of ACM Multimedia 2004, workshop on Multimedia Information Retrieval (MIR), New York, NY, USA, pp. 135–142, 2004 .
Conference Proceedings
  1. [GESI-12] S. Gesing, T. Glatard, J. Krüger, S. D. Olabarriaga, T. Solomonides, J. C. Silverstein, J. Montagnat, A. Gaignard, and D. Krefting, "HealthGrid Applications and Technologies meet Science Gateways for Life Sciences, proceedings of HealthGrid 2012", HealthGrid, IOS Press, vol. 175, 2012.
  2. [SOLO-10] T. Solomonides, I. Blanquer, V. Breton, T. Glatard, and Y. Legré, "Healthgrid Applications and Core Technologies, proceedings of HealthGrid 2010", HealthGrid, IOS Press, vol. 159, 2010.
Thesis
  1. [GLAT-07c] T. Glatard, Description, deployment and optimization of medical image analysis workflows on production grids, , Sophia-Antipolis, Université de Nice Sophia-Antipolis, nov, 2007 .
Miscellaneous
  1. [CAMA-09a] S. Camarasu-Pop, D. Sarrut, H. Benoit-Cattin, and T. Glatard, GATE-Lab, , Barcelone, Espagne, Sept, 2009.
  2. [GLAT-09c] T. Glatard, S. Camarasu-Pop, H. Benoit-Cattin, P. Clarysse, J. Montagnat, J. Moscicki, S. Olabarriaga, and D. Sarrut, Integrating pilot-jobs, workflows and virtual resource browser to foster medical image analysis on EGEE, , Catania, Italie, Mar, 2009.
  3. [CAMA-09] S. Camarasu-Pop, H. Benoit-Cattin, J. Moscicki, D. Sarrut, and T. Glatard, Results and evaluation of ThIS on grid, , Catania, Italie, Mar, 2009.
  4. [LING-08a] D. Lingrand, J. Montagnat, and T. Glatard, Estimation of latency on production grid over several weeks, , Manila, Philippines, Oncomedia, feb, 2008 .
  5. [LING-07] D. Lingrand, T. Glatard, and J. Montagnat, Taking into account the execution context to optimize medical image databases indexation, , Lyon, France, aug, 2007 .
  6. [MONT-06c] J. Montagnat, T. Glatard, D. Lingrand, and R. Texier, Exploiting production grid infrastructures for medical images analysis, , Singapore, oct, 2006 .