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Book Chapter
  1. [ZANE-13] I. Zanette, G. Daghfous, T. Weitkamp, B. Gillet, D. Adriaens, M. Langer, P. Cloetens, L. Helfen, A. Bravin, F. Peyrin, et al., "Looking Inside Marine Organisms with MRI and X-ray Tomography", Imaging Marine Life, In Press.
  2. [PEYR-12] F. Peyrin, and K. ENGELKE, "CT Imaging: Basics and New Trends", Handbook of Particle Detection and Imaging, pp. 883-915, 2012.
  3. [PETE-10] Z. Peter, and F. Peyrin, "Synchrotron Radiation Micro-CT Imaging of Bone Tissue, in Theory and Applications of CT Imaging and Analysis", InTech, pp. 233-254, 2011 .
  4. [PEYR-10] F. Peyrin, and P. Douek, "La Tomographie par rayons X", Imagerie médicale, Tome 1, pp. (in-press), 2010.
  5. [LANG-10f] M. Langer, R. Boistel, E. Pagot, P. Cloetens, and F. Peyrin, "X-ray in-line phase microtomography for biomedical applications", Microscopy: Science, Technology, Applications and Education, vol. 1, no. 4, Badajoz, Spain, Formatex Research Center, pp. 391-402, 2010.
  6. [BENH-09] A. Benhali, and F. Peyrin, "Discrete methods", Traité IC2 "Tomography", pp. 89-112, 2009.
  7. [PEYR-09c] F. Peyrin, and A. M. Charvet, "Synchrotron tomography", Traité IC2 "Tomography", pp. (in-press), 2009.
  8. [CHAR-02] A. M. Charvet, and F. Peyrin, "Chap. 15 : La tomographie synchrotron", Traité IC2 La tomographie, Paris, France, Hermès, Publ., pp. 219–237, 2002.
  9. [BENH-02] A. Benhali, and F. Peyrin, "Les méthodes discrètes", Traité IC2 La tomographie, Paris, France, Hermès, Publ., pp. 111–138, 2002.
  10. [PEYR-01] F. Peyrin, C. Muller, Y. Carillon, S. Nuzzo, A. Bonnassie, and A. Briguet, "Characterization of bone samples from synchrotron radiation microCT : evaluation of the segmentation of microMRI images", Nonivasive assessment of trabecular bone architecture and the competence of bone, pp. 129-142, 2001.
  11. [BARU-00] J. Baruchel, E. Boller, P. Cloetens, W. Ludwig, and F. Peyrin, "Microtomography at a third generation synchrotron facility", X-Ray Tomography in Material Science: Hermès, Publ., pp. 45–47, 2000.
  12. [BARU-99] J. Baruchel, E. Boller, P. Cloetens, W. Ludwig, F. Peyrin, and M. Schlenker, "Absorption and phase X-Ray imaging to investigate porous materials", Les matériaux poreux désordonnés, Les Houches, 1999.
  13. [PEYR-99e] F. Peyrin, "Medical Imaging and applications I : Synchrotron Radiation MicroTomography", Applications of Synchrotron Radiation: Editions Frontières, Publ., pp. 166–179, 1999.
  14. [LAVA-97] A. M. Laval-Jeantet, A. Elmoutaouakkil, J. P. Roux, G. Lowet, J. P. Houssard, G. Peix, and F. Peyrin, "CT and mini-CT 2D image analysis for the quantification of vertebral trabecular architecture", Bone Research in Biomechanics: IOS Press, pp. 113–119, 1997.
  15. [LAVA-96c] A. M. Laval-Jeantet, "Mesures de densité et de masse osseuse : techniques", Maladies métaboliques osseuses de l'adulte, Paris, France, Flammarion, Publ., 1996.
  16. [LAVA-93] A. M. Laval-Jeantet, F. Chevlier, C. Bergot, M. Laval-Jeantet, F. Peyrin, and J. P. Houssard, La structure trabéculaire vertébrale en tomodensitométrie, Architecture et résistance mécanique osseuses, : Masson, 1993.
  17. [GENA-92] H. K. Genant, P. Lang, P. Steiger, C. Gluer, and A. M. Laval-Jeantet, "Osteoporosis : assessment by bone densitometry", Imaging of the spine and the spinal cord, New York, Ravenpress, Publ., pp. 195–212, 1992.
Journal Article
  1. [VARG-13c] P. Varga, A. Pacureanu, M. Langer, H. Suhonen, B. Hesse, Q. Grimal, P. Cloetens, K. Raum, and F. Peyrin, "Investigation of the 3D orientation of mineralized collagen fibrils in human lamellar bone using synchrotron X-ray phase nano-tomography", Acta Biomaterialia, In Press.
  2. [SIXO-13a] B. Sixou, V. Davidoiu, M. Langer, and F. Peyrin, "ABSORPTION AND PHASE RETRIEVAL WITH TIKHONOV AND JOINT SPARSITY REGULARIZATIONS", Inverse Problems and Imaging (IPI), vol. 7, pp. 267-282, 02/2013 .
  3. [PACU-13] A. Pacureanu, A. Larrue, C. Olivier, M. Langer, M. H. Lafage-Proust, and F. Peyrin, "Adaptive filtering for enhancement of the osteocyte cell network in 3D microtomography images", IRBM, vol. in press, 2013.
  4. [LYNCH-13] R. Lynch, G. Pitson, D. Ball, L. Claude, and D. Sarrut, "Computed tomographic atlas for the new international lymph node map for lung cancer: A radiation oncologist perspective", Practical Radiation Oncology, vol. 3, no. 1, 01/2013 .
  5. [ROB-13] C. Robert, G. Dedes, G. Battistoni, T. T. Böhlen, I. Buvat, F. Cerutti, M. P. W. Chin, A. Ferrari, P. Gueth, C. Kurz, et al., "Distributions of secondary particles in proton and carbon-ion therapy: a comparison between GATE/Geant4 and FLUKA Monte Carlo codes", Physics in Medicine and Biology, vol. 58, no. 9, pp. 2879, 05/2013 . Abstract
  6. [RIT-13] S. Rit, G. Dedes, N. Freud, D. Sarrut, and J. M. Létang, "Filtered backprojection proton CT reconstruction along most likely paths", Med Phys, vol. 40, no. 3, pp. 031103, 2013 .
  7. [JAN-13] S. Jan, T. Frisson, and D. Sarrut, "GATE simulation of 12C hadrontherapy treatment combined with a PET imaging system for dose monitoring : A feasibility study", IEEE Trans. Nucl. Sci., vol. 60, no. 1 part2, pp. 423-429, 2013 .
  8. [GRAN-13] M. Granke, A. Gourrier, F. Rupin, K. Raum, F. Peyrin, M. Burghammer, A. SAÏED, and P. Laugier, "Microfibril orientation dominates the microelastic properties of bone tissue at the lamellar length scale", PlosOne, vol. in press, 2013.
  9. [SANC-13] S. SANCHEZ, V. DUPRET, P. Tafforeau, K. M. TRINAJSTIC, B. RYLL, P. J. Gouttenoire, L. WRETMAN, L. ZYLBERBERGE, F. Peyrin, and P. E. AHLBERG, "Reconstruction of muscle attachments in fossil vertebrates based on 3D bone microstructural architecture", PlosOne, vol. in press, 2013.
  10. [DELM-13] V. Delmon, S. Rit, R. Pinho, and D. Sarrut, "Registration of sliding objects using direction dependent B-splines decomposition", Physics in Medicine and Biology, vol. 58, no. 5, 02/2013 . Abstract
  11. [GIUL-13] A. Giuliani, A. Manescu, M. Langer, F. Rustichelli, V. Desiderio, F. Paino, A. De Rosa, L. Laino, R. d'Aquino, V. Tirino, et al., "Three years after transplants in human mandibles, histological and in-line HT revealed that stem cells regenerated a compact rather than a spongy bone: biological and clinical implication", Stem Cells Translational Medicine, vol. 2, pp. 316-324, 2013.
  12. [DIEM-12] P. C. Diemoz, A. Bravin, M. Langer, and P. Coan, "Analytical and experimental determination of signal-to-noise ratio and figure of merit in three phase-contrast imaging techniques", Optics Express, vol. 20, pp. 27670–27690, 2012 .
  13. [SANS-12a] V. Sansalone, V. Bousson, S. Naili, C. Bergot, F. Peyrin, J. D. Laredo, and G. Haiat, "Anatomical distribution of the degree of mineralization of bone tissue in human femoral neck: impact on biomechanical properties", Bone, vol. 50, no. 4, pp. 876–884, 04/2012 . Abstract

    {PMID:} 22245631

  14. [VAND-12] J. Vandemeulebroucke, O. Bernard, S. Rit, J. Kybic, P. Clarysse, and D. Sarrut, "Automated Segmentation of a Motion Mask to Preserve Sliding Motion in Deformable Registration of Thoracic CT", Med Phys, vol. 39, no. 2, pp. 1006-1015, 02/2012 .
  15. [PITS-12] G. Pitson, R. Lynch, L. Claude, and D. Sarrut, "A critique of the IASLC lymph node map: a radiation oncology perspective", Journal of Thoracic Oncology, vol. 7, no. 3, pp. 478–480, 03/2012 .
  16. [SANS-12b] V. Sansalone, V. Bousson, S. Naili, C. Bergot, F. Peyrin, J. D. Laredo, and G. Haïat, "Effects of the axial variations of porosity and mineralization on the elastic properties of the human femoral neck", Computer Modeling in Engineering & Sciences, vol. 87, no. 5, pp. 387-410, 2012.
  17. [PREI-12] B. Preininger, B. Hesse, D. Rohrbach, P. Varga, H. Gerigk, M. Langer, F. Peyrin, C. Perka, and K. Raum, "Histogram feature-based classification improves differentiability of early bone healing stages from micro-computed tomographic data", Journal of Computer Assisted Tomography, vol. 36, no. 4, pp. 469-476, 2012.
  18. [FASSI-12] A. Fassi, M. Riboldi, G. Baroni, J. Schaerer, and D. Sarrut, "In Regard to Yang et al", International Journal of Radiation Oncology * Biology * Physics, vol. 84, no. 2, 2012 .  Download: Fassi et al._2012_In regard to Yang et al.pdf (45.89 KB)
  19. [BOUI-12] G. Bouilhol, M. Ayadi, S. Rit, S. Thengumpallil, J. Schaerer, J. Vandemeulebroucke, L. Claude, and D. Sarrut, "Is abdominal compression useful in lung stereotactic body radiation therapy? A 4DCT and dosimetric lobe-dependent study", Phys Med, 05/2012 .
  20. [GROS-12] T. Gross, D. H. Pahr, F. Peyrin, and P. K. Zysset, "Mineral heterogeneity has a minor influence on the apparent elastic properties of human cancellous bone: a SR-µCT-based finite element study", Computer methods in biomechanics and biomedical engineering, 01/2012 . Abstract

    {PMID:} 22263706

  21. [SCHA-12] J. Schaerer, A. Fassi, M. Riboldi, P. Cerveri, G. Baroni, and D. Sarrut, "Multi-dimensional respiratory motion tracking from markerless optical surface imaging based on deformable mesh registration", Physics in Medicine and Biology, vol. 57, no. 2, pp. 357-373, 01/2012 .
  22. [PACU-12] A. Pacureanu, M. Langer, E. Boller, P. Tafforeau, and F. Peyrin, "Nanoscale imaging of the bone cell network with synchrotron X-ray tomography: optimization of acquisition setup", Medical physics, vol. 39, no. 4, pp. 2229–2238, 2012 . Abstract

    {PMID:} 22482644

  23. [ROHR-12] D. Rohrbach, S. Lakshmanan, F. Peyrin, M. Langer, A. Gerisch, Q. Grimal, P. Laugier, and K. Raum, "Spatial distribution of tissue level properties in a human femoral cortical bone", Journal of Biomechanics, vol. 45, pp. 2264-2270, 2012 . Abstract
  24. [ROCH-12] B. Roche, V. David, A. {Vanden-Bossche}, F. Peyrin, L. Malaval, L. Vico, and {M. - H. } {Lafage-Proust}, "Structure and quantification of microvascularisation within mouse long bones: what and how should we measure?", Bone, vol. 50, no. 1, pp. 390–399, 01/2012 . Abstract

    {PMID:} 22019874

  25. [LANG-12b] M. Langer, P. Cloetens, A. Pacureanu, and F. Peyrin, "X-ray in-line phase tomography of multimaterial objects", Optics Letters, vol. 37, no. 11, pp. 2151-2153, 2012.
  26. [ZULU-11e] M. A. Zuluaga, A. Larrue, A. Rattner, L. Vico, and F. Peyrin, "Acquisition of Synchrotron Radiation micro-CT images for the investigation of bone micro-cracks", The MIDAS Journal - Medical Image Computing, pp. 7, 2011 .
  27. [KOCH-11] M. Kocher, R. Soffietti, U. Abacioglu, S. Villa, F. Fauchon, B. G. Baumert, L. Fariselli, T. Tzuk-Shina, R. D. Kortmann, C. Carrie, et al., "Adjuvant whole-brain radiotherapy versus observation after radiosurgery or surgical resection of one to three cerebral metastases: results of the EORTC 22952-26001 study}", J. Clin. Oncol., vol. 29, pp. 134–141, Jan, 2011.
  28. [DETT-11] V. Detti, D. Grenier, E. Perrin, and O. Beuf, "Assessment of RF self-heating around a metallic wire with MR T1-based thermometry", Magn Reson Med, vol. 66, no. 2, pp. 448-455, Feb, 2011 .
  29. [GRAN-11] M. Granke, Q. Grimal, A. Saied, P. Nauleau, F. Peyrin, and P. Laugier, "Change in porosity is the major determinant of the variation of cortical bone elasticity at the millimeter scale in aged women", Bone, vol. 49, no. 5, pp. 1020-1026, 2011 . Abstract

    {PMID:} 21855669

  30. [RIT-11a] S. Rit, J. Nijkamp, M. van Herk, and J. - J. Sonke, "Comparative study of respiratory motion correction techniques in cone-beam computed tomography", Radiat Oncol, vol. 100, pp. 356-359, 09/2011 .  Download: rit2011a.pdf (289.61 KB)
  31. [PEYR-11] F. Peyrin, "Evaluation of bone scaffolds by micro-CT", Osteoporosis International: A Journal Established as Result of Cooperation Between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the {USA}, vol. 22, no. 6, pp. 2043–2048, 2011 . Abstract

    {PMID:} 21523402

  32. [MURP-11] K. Murphy, B. van Ginneken, J. Reinhardt, S. Kabus, K. Ding, X. Deng, K. Cao, K. Du, G. Christensen, V. Garcia, et al., "Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 challenge", IEEE Trans Med Imaging, vol. 30, no. 11, pp. 1901-20, 2011 .
  33. [DUCR-11] N. Ducros, C. D’ANDREA, A. BASSI, and F. Peyrin, "Fluorescence diffuse optical tomography: time-resolved versus continuous-wave in the reflectance configuration", IRBM BioMedical Engineering and Research, vol. 32, pp. 234-250, 2011.
  34. [JAN-11] S. Jan, D. Benoit, E. Becheva, T. Carlier, F. Cassol, P. Descourt, T. Frisson, L. Grevillot, L. Guigues, L. Maigne, et al., "GATE V6: a major enhancement of the GATE simulation platform enabling modelling of CT and radiotherapy", Physics in medicine and biology, vol. 56, no. 4, pp. 881–901, 2011 .
  35. [PRIS-11] R. Prisby, A. Guignandon, A. Vanden-Bossche, F. Mac-Way, M. - T. Linossier, F. Peyrin, M. Langer, Z. - A. Peter, N. Laroche, L. Malaval, et al., "Intermittent PTH 1-84 is osteoanabolic but not osteoangiogenic and relocates bone marrow blood vessels closer to bone forming sites", Journal of Bone and Mineral Research, vol. 26, no. 11, pp. 2583-2596, 2011.
  36. [YANG-11] F. Yang, Y. M. Zhu, S. Rappachi, J. H. Luo, M. Robini, and P. Croisille, "Interpolation of vector fields from human cardiac DT-MRI", Physics in Medicine and Biology, vol. 56, no. 5, pp. 1415-1430, 2011.
  37. [ZULU-11d] M. A. Zuluaga, L. Ibañez, and F. Peyrin, "Large Image Streaming using ITKv4", The Insight Journal, vol. January-June, 2011 .
  38. [GREV-11b] L. Grevillot, D. Bertrand, F. Dessy, N. Freud, and D. Sarrut, "A Monte Carlo pencil beam scanning model for proton treatment plan simulation using GATE/GEANT4", Physics in Medicine and Biology, vol. 56, no. 16, pp. 5203, 2011 . Abstract
  39. [DAVI-11a] V. Davidoiu, B. Sixou, M. Langer, and F. Peyrin, "Non-linear iterative phase retrieval based on Frechet derivative", Optics EXPRESS, vol. 19, no. 23, pp. 22809–22819, 2011 . Abstract
  40. [ROBI-11] M. Robini, and P. - J. Reissman, "On simulated annealing with temperature-dependent energy and temperature-dependent communication", Statistics and Probability Letters, vol. 81, no. 8, pp. 915-920, 2011.
  41. [GREV-11] L. Grevillot, T. Frisson, D. Maneval, N. Zahra, J. N. Badel, and D. Sarrut, "Simulation of a 6 MV Elekta Precise Linac photon beam using GATE / GEANT4", Phys Med Biol, vol. 56, no. 4, 2011 .
  42. [LANG-11a] M. Langer, R. Prisby, Z. Peter, A. Guignandon, M. H. Lafage-Proust, and F. Peyrin, "Simultaneous 3D Imaging of Bone and Vessel Microstructure in a Rat Model", IEEE Transactions on Nuclear Science, vol. 58, pp. 139-145, 2011.
  43. [VAND-11] J. Vandemeulebroucke, S. Rit, J. Kybic, P. Clarysse, and D. Sarrut, "Spatio-Temporal Motion Estimation for Respiratory-Correlated Imaging of the Lungs", Med Phys, vol. 38, no. 1, pp. 166-178, 2011 .
  44. [LARR-11] A. Larrue, A. Rattner, Z. Peter, C. Olivier, N. Laroche, L. Vico, and F. Peyrin, "Synchrotron Radiation Micro-CT at the Micrometer Scale for the Analysis of the Three-Dimensional Morphology of Microcracks in Human Trabecular Bone", {PloS} One, vol. 6, no. 7, pp. e21297, 2011 . Abstract

    {PMID:} 21750707

  45. [BOIS-11] R. Boistel, T. Aubin, P. Cloetens, M. Langer, B. Gillet, P. Josset, N. Pollet, and A. Herrel, "Whispering to the deaf: communication by a frog without external vocal sac or tympanum in noisy environments", PLoS ONE, vol. 6, pp. e22080, 2011.
  46. [AYAD-11] M. Ayadi, G. Bouilhol, L. Imbert, C. Ginestet, and D. Sarrut, "[Scan acquisition parameter optimization for the treatment of moving tumors in radiotherapy.]", Cancer radiotherapie : journal de la Societe francaise de radiotherapie oncologique, vol. 15, no. 2, 2011 .
  47. [pmid21529869] L. Taillandier, M. Blonski, C. Carrie, V. Bernier, F. Bonnetain, F. Bourdeaut, I. C. Thomas, P. Chastagner, F. Dhermain, F. Doz, et al., "[Medulloblastomas: review]}", Rev. Neurol. (Paris), vol. 167, pp. 431–448, May, 2011.
  48. [pmid21700525] G. Buiret, P. Ceruse, A. Ramade, C. Carrie, and P. Pommier, "Acinic cell carcinoma of the parotid gland with skull base invasion: Case study, managed by exclusive external 3D radiation therapy}", Eur Ann Otorhinolaryngol Head Neck Dis, Jun, 2011.
  49. [pmid20452732] P. Pommier, S. Dussart, T. Girinsky, S. Chabaud, J. L. Lagrange, T. D. Nguyen, V. Beckendorff, A. D'Hombres, X. Artignan, P. Y. Bondiau, et al., "Impact of 18F-fluoro-2-deoxyglucose positron emission tomography on treatment strategy and radiotherapy planning for stage I-II Hodgkin disease: a prospective multicenter study}", Int. J. Radiat. Oncol. Biol. Phys., vol. 79, pp. 823–828, Mar, 2011.
  50. [pmid21410976] P. Cellier, B. Leduc, L. Martin, B. Vie, C. Chevelle, V. Vendrely, A. Salemkour, C. Carrie, G. Calais, P. Burtin, et al., "Phase II study of preoperative radiation plus concurrent daily tegafur-uracil (UFT) with leucovorin for locally advanced rectal cancer}", BMC Cancer, vol. 11, pp. 98, 2011.
  51. [pmid21623974] K. Kuhn, C. Carrie, E. Giraud, Y. Wang, E. H. Meyer, R. Narsai, C. C. des Francs-Small, B. Zhang, M. W. Murcha, and J. Whelan, "The RCC1 family protein RUG3 is required for splicing of nad2 and complex I biogenesis in mitochondria of Arabidopsis thaliana}", Plant J., vol. 67, pp. 1067–1080, Sep, 2011.
  52. [RUPI-10] F. Rupin, D. Bossis, L. Vico, F. Peyrin, K. Raum, and P. Laugier, "Adaptive remodeling of trabecular bone core cultured in 3D bioreactor providing cyclic loading: an acoustic microscopy study", Ultrasound Med Biol, vol. 36, no. 6, pp. 999-1007, 2010.
  53. [SARR-10] D. Sarrut, and J. Vandemeulebroucke, "B-LUT: Fast and low memory B-spline image interpolation", Comput Meth Prog Bio, vol. 99, no. 2, pp. 172-178, aug, 2010 .
  54. [KOML-10] V. S. Komlev, M. Mastrogiacomo, R. C. Pereira, F. Peyrin, F. Rustichelli, and R. Cancedda, "Biodegradation of porous calcium phosphate scaffolds in an ectopic bone formation model studied by X-ray computed microtomograph", Eur Cell Mater, vol. 29, no. 19, pp. 136-46, 2010.
  55. [SANS-10] V. Sansalone, S. Naili, V. Bousson, C. Bergot, F. Peyrin, J. Zarka, J. D. Laredo, and G. Haiat, "Determination of the heterogeneous anisotropic elastic properties of human femoral bone: from nanoscopic to organ scale", J Biomech, vol. 43, no. 10, pp. 1857-1863, 07/2010.
  56. [SANS-10] V. Sansalone, S. Naili, V. Bousson, C. Bergot, F. Peyrin, J. Zarka, J. D. Laredo, and G. Haiat, "Determination of the heterogeneous anisotropic elastic properties of human femoral bone: from nanoscopic to organ scale", Journal of biomechanics, vol. 43, no. 10, pp. 1857–1863, 2010 . Abstract

    {PMID:} 20392446

  57. [CAMA-10] S. Camarasu-Pop, T. Glatard, J. T. Moscicki, H. Benoit-Cattin, and D. Sarrut, "Dynamic partitioning of GATE Monte-Carlo simulations on EGEE", Journal of Grid Computing, vol. 8, no. 2, pp. 241-259, mar, 2010 .
  58. [FRIN-10] C. Frindel, M. Robini, P. Croisille, and Y. M. Zhu, "A graph-based approach for automatic cardiac tractography", Magn Reson Med, vol. 64, no. 4, pp. 1215-1229, 2010.
  59. [FEI-10] J. Fei, F. Peyrin, L. Malaval, L. Vico, and M. H. Lafage-Proust, "Imaging and Quantitative Assessment of Long Bone Vascularization in the Adult Rat using Microcomputed Tomography", Anat Rec, vol. 293, no. 2, pp. 215-224, 2010 .
  60. [ZAHR-10] N. Zahra, T. Frisson, L. Grevillot, P. Lautesse, and D. Sarrut, "Influence of Geant4 parameters on dose distribution and computation time for carbon ion therapy simulation", Physica Medica: European Journal of Medical Physics, vol. 26, no. 4, pp. 202-206, oct, 2010 .
  61. [PEYR-10a] F. Peyrin, D. Attali, C. Chappard, and C. L. Benhamou, "New geometric parameters for the description of three-dimensional bone structures from very high resolution microtomography images", Med. Phys, vol. 37, no. 8, pp. 4364-4376, 08/2010.
  62. [ROBI-10] M. Robini, and I. E. Magnin, "Optimization by stochastic continuation", SIAM Journal on Imaging Sciences, vol. 3, no. 4, pp. 1096-1121, 2010.
  63. [GREV-10] L. Grevillot, T. Frisson, N. Zahra, D. Bertrand, F. Stichelbaut, N. Freud, and D. Sarrut, "Optimization of GEANT4 settings for Proton Pencil Beam Scanning simulations using GATE", Nucl Instr Meth Phys Res B, vol. 268, pp. 3295-3305, 2010 .
  64. [LANG-10d] M. Langer, P. Cloetens, and F. Peyrin, "Regularization of Phase Retrieval with Phase-Attenuation Duality Prior for 3D Holotomography", IEEE Trans Image Proces, vol. 19, pp. 2428 - 2436, 2010 .
  65. [LANG-10c] M. Langer, Y. Liu, F. Tortelli, P. Cloetens, R. Cancedda, and F. Peyrin, "Regularized phase tomography enables study of mineralized and unmineralized tissue in porous bone scaffold", J Microsc, vol. 238, no. 3, pp. 230-239, 2010 .
  66. [BROC-10] K. K. Brock, D. R. A. Consortium, V. Boldea, and D. Sarrut, "Results of a Multi-Institution Deformable Registration Accuracy Study (MIDRAS)", Int J Radiat Onc, vol. 76, no. 2, pp. 583-596, feb, 2010 .
  67. [DUCR-10] N. Ducros, A. Da Silva, J. M. Dinten, C. S. Seelamantula, M. Unser, and F. Peyrin, "A Time-domain wavelet-based approach for fluorescence diffuse optical tomography", Med Phys, vol. 37, no. 6, pp. 2890-2900, 2010.
  68. [FRAN-10a] M. Frandes, A. Zoglauer, V. Maxim, and R. Prost, "A Tracking Compton-scattering Imaging System for Hadron Therapy Monitoring", IEEE Trans Nucl Sci, no. 1, pp. (144-150), 2010.
  69. [pmid19632060] H. Sudour, P. Chastagner, L. Claude, E. Desandes, M. Klein, C. Carrie, and V. Bernier, "Fertility and pregnancy outcome after abdominal irradiation that included or excluded the pelvis in childhood tumor survivors}", Int. J. Radiat. Oncol. Biol. Phys., vol. 76, pp. 867–873, Mar, 2010.
  70. [pmid20651189] P. Pommier, E. Touboul, S. Chabaud, S. Dussart, C. Le Pechoux, F. Giammarile, and C. Carrie, "Impact of (18)F-FDG PET on treatment strategy and 3D radiotherapy planning in non-small cell lung cancer: A prospective multicenter study}", AJR Am J Roentgenol, vol. 195, pp. 350–355, Aug, 2010.
  71. [pmid20716594] C. Alapetite, H. Brisse, C. Patte, M. A. Raquin, G. Gaboriaud, C. Carrie, J. L. Habrand, P. Thiesse, J. C. Cuilliere, V. Bernier, et al., "Pattern of relapse and outcome of non-metastatic germinoma patients treated with chemotherapy and limited field radiation: the SFOP experience}", Neuro-oncology, vol. 12, pp. 1318–1325, Dec, 2010.
  72. [pmid20116933] C. de la Fouchardiere, S. Negrier, H. Labrosse, I. Martel Lafay, F. Desseigne, P. Meeus, D. Tavan, F. Petit-Laurent, M. Rivoire, D. Perol, et al., "Phase I study of daily irinotecan as a radiation sensitizer for locally advanced pancreatic cancer}", Int. J. Radiat. Oncol. Biol. Phys., vol. 77, pp. 409–413, Jun, 2010.
  73. [MAXI-09] V. Maxim, M. Frandes, and R. Prost, "Analytical inversion of the Compton Transform using the full set of available projections", Inverse Problems, no. 9, pp. (1-31), 2009 .
  74. [RUPI-09] F. Rupin, A. Saied, D. Dalmas, F. Peyrin, S. Haupert, K. Raum, E. Barthel, G. Boivin, and P. Laugier, "Assessment of Microelastic Properties of Bone Using Scanning Acoustic Microscopy: A Face-to-Face Comparison with Nanoindentation", Jpn J Appl Phys, vol. 48, no. 7, Part 2 Sp. Iss. SI, pp. 1-6, 2009 .
  75. [RIT-09] S. Rit, D. Sarrut, and L. Desbat, "Comparison of Analytic and Algebraic Methods for Motion-Compensated Cone-Beam CT Reconstruction of the Thorax", IEEE Trans Med Imaging, vol. 28, no. 10, pp. 1513-1525, 2009 .
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  77. [DUCR-09d] N. Ducros, L. Herve, A. Da Silva, J. M. Dinten, and F. Peyrin, "A comprehensive study of the use of temporal moments in time-resolved diffuse optical tomography: part I. Theoretical material", Phys Med Biol, vol. 54, no. 23, pp. 7089-7105, DEC 7, 2009 .
  78. [DUCR-09e] N. Ducros, A. Da Silva, L. Herve, J. M. Dinten, and F. Peyrin, "A comprehensive study of the use of temporal moments in time-resolved diffuse optical tomography: part II. Three-dimensional reconstructions", Phys Med Biol, vol. 54, no. 23, pp. 7107-7119, DEC 7, 2009 .
  79. [LANG-09c] M. Langer, P. Cloetens, and F. Peyrin, "Fourier-wavelet regularization of phase retrieval in x-ray in-line phase tomography", J Opt Soc Am A, vol. 26, pp. 1876-1881, 2009.
  80. [PEYR-09] F. Peyrin, "Investigation of bone with synchrotron radiation imaging: from micro to nano", Osteoporosis Int, vol. 20, pp. 1057-1063, 2009 .
  81. [FRIS-09] T. Frisson, N. Zahra, P. Lautesse, and D. Sarrut, "Monte-Carlo based prediction of radiochromic film response for hadrontherapy dosimetry", Nucl Instr Meth Phys Res A, vol. 606, no. 3, pp. 749-754, 2009 .
  82. [MEHT-09c] M. P. Mehta, W. R. Shapiro, S. C. Phan, R. Gervais, C. Carrie, P. Chabot, R. A. Patchell, M. J. Glantz, L. Recht, C. Langer, et al., "Motexafin gadolinium combined with prompt whole brain radiotherapy prolongs time to neurologic progression in non-small-cell lung cancer patients with brain metastases: results of a phase III trial", Int J Radiat Oncol Biol Phys, vol. 73, no. 4, pp. 1069-76, 2009.
  83. [CARR-09b] C. Carrie, J. Grill, D. Figarella-Branger, V. Bernier, L. Padovani, L. J. Habrand, M. Benhassel, M. Mege, M. Mahe, P. Quetin, et al., "Online Quality Control, Hyperfractionated Radiotherapy Alone and Reduced Boost Volume for Standard Risk Medulloblastoma: Long-Term Results of MSFOP 98", J Clin Oncol, pp. (in-press), 2009.
  84. [MAZE-09a] R. Mazeron, B. Etienne Mastroianni, D. Perol, D. Arpin, M. Vincent, L. Falchero, I. Martel Lafay, C. Carrie, and L. Claude, "Predictive factors of late radiation fibrosis: a prospective study in non-small cell lung cancer", J Clin Oncol, pp. (in-press), 2009.
  85. [HAIA-09] G. Haiat, F. Padilla, M. Svrcekova, Y. Chevalier, D. Pahr, F. Peyrin, P. Laugier, and P. Zysset, "Relationship between ultrasonic parameters and apparent trabecular bone elastic modulus: A numerical approach", J Biomech, vol. 42, no. 13, pp. 2033-2039, SEP 18, 2009 .
  86. [PRAD-09] A. Pradel, M. Langer, J. Maisey, D. Geffard-Kuriyama, P. Cloetens, P. Janvier, and P. Tafforeau, "Skull and brain of a 300 million-year-old chimaeroid fish revealed by synchrotron holotomography", Proc Nat Acad Sci U S A, pp. 5224-5228, 2009.
  87. [KOML-09] V. V. S. Komlev, M. Mastrogiacomo, F. Peyrin, R. Cancedda, and F. Rustichelli, "X-Ray Synchrotron Radiation Pseudo-Holotomography as a New Imaging Technique to Investigate Angio- and Microvasculogenesis with No Usage of Contrast Agents", Tissue Eng Part C, Methods, vol. 15, no. 3, pp. 425-430, feb, 2009 . Abstract
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  92. [pmid19346145] O. Diaz, R. Mazeron, E. Martin, and C. Carrie, "[Toxicity of radiation therapy and antiangiogenics combination: a case report]}", Cancer Radiother, vol. 13, pp. 205–208, Jun, 2009.
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  97. [pmid19273707] C. Carrie, J. Grill, D. Figarella-Branger, V. Bernier, L. Padovani, J. L. Habrand, M. Benhassel, M. Mege, M. Mahe, P. Quetin, et al., "Online quality control, hyperfractionated radiotherapy alone and reduced boost volume for standard risk medulloblastoma: long-term results of MSFOP 98}", J. Clin. Oncol., vol. 27, pp. 1879–1883, Apr, 2009.
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  99. [BOLD-08] V. Boldea, D. Sarrut, G. Sharp, and S. Jiang, "4D-CT lung motion models construction with deformable registration: estimation of motion nonlinearity and hysteresis", Med Phys, vol. 35, no. 3, pp. 1008-1018, 2008 .
  100. [DUCR-08] N. Ducros, A. Da Silva, J. M. Dinten, and F. Peyrin, "Approximations of the measurable quantity in diffuse optical problems: theoretical analysis of model deviations", J Opt Soc Am A, vol. 25, no. 5: OSA, pp. 1174–1180, 2008 .
  101. [PETE-08] Z. Peter, V. Bousson, C. Bergot, and F. Peyrin, "A constrained region growing approach based on watershed for the segmentation of low contrast structures in bone micro-CT", Pattern Recogn, vol. 41, pp. 2358–2368, 2008.
  102. [WU-08] Z. Wu, E. Rietzel, V. Boldea, D. Sarrut, and G. Sharp, "Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations", Med Phys, vol. 35, no. 2, pp. 775-781, 2008 .
  103. [HAIA-08] G. Haiat, F. Padilla, F. Peyrin, and P. Laugier, "Fast wave ultrasonic propagation in trabecular bone: Numerical study of the influence of porosity and structural anisotropy", J Acoust Soc Am, vol. 123, no. 3: ASA, pp. 1694–1705, 2008 .
  104. [PEYR-08] F. Peyrin, "In vitro assessment of cortical bone micro-structure from micro-CT", Osteoporosis Int, vol. 19, no. 19, pp. 860–863, 2008.
  105. [CARR-08] C. Carrie, and P. Thomas, "The Pediatric Radiation Oncology Society (PROS): why?", Int J Radiat Oncol Biol Phys, vol. 71, no. 13, pp. 666, 2008.
  106. [LANG-08a] M. Langer, P. Cloetens, J. P. Guigay, and F. Peyrin, "Quantitative comparison of direct phase retrieval algorithms in in-line phase tomography", Med Phys, vol. 35, pp. 4556–4566, 2008 .
  107. [SARR-08] D. Sarrut, and L. Guigues, "Region-oriented CT image representation for reducing computing time of Monte Carlo simulations", Med Phys, vol. 35, no. 4, pp. 1452–1463, apr, 2008 .
  108. [PADI-08] F. Padilla, F. Jenson, V. Bousson, F. Peyrin, and P. Laugier, "Relationships of trabecular bone structure with quantitative ultrasound parameters: in vitro study on human proximal femur using transmission and backscatter measurements", Bone, vol. 42, no. 6, pp. 1193–202, jun, 2008 .
  109. [pmid18577561] D. Frappaz, M. Schell, P. Thiesse, P. Marec-Berard, C. Mottolese, D. Perol, C. Bergeron, T. Philip, A. C. Ricci, S. Galand-Desme, et al., "Preradiation chemotherapy may improve survival in pediatric diffuse intrinsic brainstem gliomas: final results of BSG 98 prospective trial}", Neuro-oncology, vol. 10, pp. 599–607, Aug, 2008.
  110. [BOSS-07] E. Bossy, P. Laugier, F. Peyrin, and F. Padilla, "Attenuation in trabecular bone: A comparison between numerical simulation and experimental results in human femur", J Acoust Soc Am, vol. 122, no. 4, pp. 2469-2475, 2007.
  111. [CANC-07] R. Cancedda, A. Cedola, A. Guilani, V. Komlev, S. Lagomarsino, M. Mastrogiacomo, F. Peyrin, and F. Rustichelli, "Bulk and interface investigations of scaffolds and tissue-engineered bones by X-ray microtomography and X-ray microdiffraction", Biomaterials, vol. 28, no. 15, pp. 2505-2524, 2007.
  112. [SARR-07] D. Sarrut, B. Delhay, P. F. Villard, V. Boldea, M. Beuve, and P. Clarysse, "A comparison framework for breathing motion estimation methods from 4D imaging", IEEE Trans Med Imaging, vol. 26, no. 12, pp. 1636-1648, 2007 .
  113. [APOS-07] L. Apostol, and F. Peyrin, "Connectivity Analysis in Very Large 3D Microtomographic Images", IEEE Trans Nucl Sci, vol. 54, no. 1, pp. (197-172), 2007.
  114. [MAST-07] M. Mastrogiacomo, A. Papadimitropoulos, A. Cedola, F. Peyrin, P. Giononni, S. G. Pearce, M. Alini, C. Giannini, A. Guagliardi, and R. Cancedda, "Engineering of Bone using Bone Marrow Stromal Cells and a Silicon-Stabilized Tricalcium Phosphate Bioceramic: evidence for a coupling between Bone Formation and Scaffold Resorption", Biomaterials, vol. 28, no. 7, pp. 1376-1384, 2007.
  115. [BURG-07] A. Burghardt, Y. Wang, H. Elalieh, X. Thibault, D. Bikle, F. Peyrin, and S. Majumdar, "Evaluation of foetal bone structure and mineralization in IGF-I deficient mice using synchrotron radiation microtomography and Fourier transform infrared spectroscopy", Bone, vol. 40, no. 1, pp. 160-168, 2007.
  116. [VALT-07a] S. Valton, F. Peyrin, P. Delpierre, F. Debarbieux, A. Bonissent, R. Khoury, C. Meessen, C. Morel, and D. Sappey-Marinier, "Evaluation of tomographic reconstruction methods for small animal microCT and microPET/CT", Nucl Instr Meth Phys Res A, vol. 571, pp. 278-281, 2007.
  117. [FINE-07] G. Finet, M. Gilard, B. Perrenot, G. Rioufol, P. Motreff, L. Gavit, and R. Prost, "Fractal geometry of arterial coronary bifurcations. A quantitative coronary angiography and intravascular ultrasound analysis", EuroIntervention, vol. 3, pp. 490–498, 2007.
  118. [FOLL-07] H. Follet, F. Peyrin, E. Vidal-Salle, A. Bonnassie, C. Rumelhart, and P. J. Meunier, "Intrinsic mechanical properties of trabecular calcaneus determined by finite-element models using 3D synchrotron microtomography", J Biomech, vol. 40, no. 10, pp. (2174–2183), 2007.
  119. [PAPA-07] A. Papadimitropoulos, M. Mastrogiacomo, F. Peyrin, E. Molinari, V. S. Komlev, F. Rustichelli, and R. Cancedda, "Kinetics of in vivo bone deposition by bone marrow stromal cells within a resorbable porous calcium phosphate scaffold: an X-ray computed microtomography study", Biotechnol Bioeng, vol. 98, no. 1, pp. 271-281, 2007.
  120. [GUIG-07] J. P. Guigay, M. Langer, R. Boistel, and P. Cloetens, "Mixed contrast transfer and transport of intensity approach for phase retrieval in the Fresnel region", Optics Letters, vol. 32, pp. 1617–1619, 2007 .
  121. [PERR-07b] B. Perrenot, R. Vaillant, R. Prost, G. Finet, P. Douek, and F. Peyrin, "Motion correction for coronary stent reconstruction from rotational x-ray projection sequences", IEEE Trans Med Imaging, vol. 26, no. 10, pp. 1412-1423, 2007.
  122. [DELP-07a] P. Delpierre, S. Basolo, J. F. Berar, A. Bonissent, P. Breugnon, N. Boudet, B. Caillot, B. Chantepie, J. C. Clemens, F. Debarbieux, et al., "PIXSCAN: Pixel Detector CT-Scanner for Small Animal Imaging", Nucl Instr Meth Phys Res A, vol. 571, pp. 425-428, 2007.
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  124. [PEYR-07a] F. Peyrin, M. Mastrogiacomo, R. Cancedda, and R. Martinetti, "SEM and 3D synchrotron radiation microtomography in the study of bioceramic scaffolds for tissue engineering applications", Biotechnol Bioeng, vol. 97, no. 3, pp. 638-348, 2007.
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  126. [PEYR-07b] F. Peyrin, Z. Peter, A. Larrue, A. Bonnassie, and D. Attali, "Three-dimensional image-based characterisation of porous media : application to bone micro-architecture", Image Anal Stereol, vol. 26, no. 3, pp. 179–185, Novembre, 2007.
  127. [PEYR-07c] F. Peyrin, "Three-dimensional image-based characterisation of porous media : application to bone micro-architecture", Osteoporosis Int, vol. 18, no. 6, pp. 837–839, 2007.
  128. [HAIA-07] G. Haiat, F. Padilla, F. Peyrin, and P. Laugier, "Variation of ultrasonic parameters with microstructure and material properties of trabecular bone: a three-dimensional model simulation", J Bone Min Research, vol. 22, no. 5, pp. 665–674, 2007.
  129. [RAUM-07] K. Raum, T. Hofmann, I. Leguerney, A. Saied, F. Peyrin, L. Vico, and P. Laugier, "Variations of microstructure, mineral density and tissue elasticity in B6/C3H mice", Bone, vol. 41, no. 6, pp. 1017–1024, 2007 .
  130. [pmid17869564] C. Carrie, and P. Pommier, "[Salvage radiotherapy in rising PSA after radical prostatectomy]}", Cancer Radiother, vol. 11, pp. 370–372, Nov, 2007.
  131. [pmid17208387] L. Claude, C. Malet, P. Pommier, P. Thiesse, S. Chabaud, and C. Carrie, "Active breathing control for Hodgkin's disease in childhood and adolescence: feasibility, advantages, and limits}", Int. J. Radiat. Oncol. Biol. Phys., vol. 67, pp. 1470–1475, Apr, 2007.
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  135. [pmid16987544] T. Petit, M. Velten, A. D'Hombres, C. Marchal, X. Montbarbon, F. Mornex, P. Quetin, J. P. Gerard, P. Romestaing, and C. Carrie, "Long-term survival of 106 stage III ovarian cancer patients with minimal residual disease after second-look laparotomy and consolidation radiotherapy}", Gynecol. Oncol., vol. 104, pp. 104–108, Jan, 2007.
  136. [pmid17568995] M. P. Sunyach, A. Jouvet, D. Perol, E. Jouanneau, J. Guyotat, L. Gignoux, C. Carrie, and D. Frappaz, "Role of exclusive chemotherapy as first line treatment in oligodendroglioma}", J. Neurooncol., vol. 85, pp. 319–328, Dec, 2007.
  137. [VALT-06b] S. Valton, F. Peyrin, and D. Sappey-Marinier, "Analysis of Cone Beam Artifacts in Off-Centered Circular CT for Four Reconstruction Methods", Int J Biomed Imaging, vol. 2006, pp. Article ID 80421, 8 pages, 2006.
  138. [HOFM-06] T. Hofman, K. Raum, I. Leguerney, A. Saied, F. Peyrin, L. Vico, and P. Laugier, "Assessment of bone structure and acoustic impedance in C3H and BL6 mice using high resolution scanning acoustic microscopy", Ultrasonics, vol. 44, supp 1, pp. pp e1307-e1311, 2006.
  139. [ANAS-06] C. A. Anastassiou, N. Ducros, K. H. Parker, and D. O'Hare, "Characterization of ac Voltammetric Reaction–Diffusion Dynamics: From Patterns to Physical Parameters", Anal Chem, vol. 78, no. 13, pp. 4383–4389, 2006 . Abstract
  140. [CHAP-06a] C. Chappard, A. Basillais, C. L. Benhamou, A. Bonnassie, B. Brunet-Imbault, N. Bonnet, and F. Peyrin, "Comparison of synchrotron radiation and conventional X-ray microcomputed tomography for assessing trabecular bone microarchitecture of human femoral heads", Med Phys, vol. 33, no. 9, pp. 3568-3577, 2006 .
  141. [SARR-06a] D. Sarrut, "Deformable Registration for Image-Guided Radiation Therapy", Zeitschrift für Medizinische Physik, vol. 16, pp. 285–297, dec, 2006 .
  142. [RAUM-06a] K. Raum, R. O. Cleveland, F. Peyrin, and P. Laugier, "Derivation of elastic stiffness from site-matched mineral density and acoustic impedance maps", Phys Med Biol, vol. 51, no. 3, pp. 747-758, 2006 .
  143. [RIT-06] S. Rit, D. Sarrut, V. Boldea, and C. Ginestet, "Extraction du signal respiratoire à partir de projections cone-beam pour l'imagerie TDM 4D", Traitement du Signal, vol. 23, no. 3-4, pp. 307–319, 2006 .
  144. [ATOU-06] H. Atoui, S. Miguet, and D. Sarrut, "A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy", Image Anal Stereol, vol. 25, no. 2, pp. 95-103, jun, 2006 .
  145. [VALT-06a] S. Valton, F. Peyrin, and D. Sappey-Marinier, "A FDK-based Reconstruction Method for Off-centered Circular Trajectory Cone Beam Tomography", IEEE Trans Nucl Sci, pp. 2736-2745, 2006.
  146. [KOML-06] V. Komlev, F. Peyrin, M. Mastrogiacomo, A. Cedola, A. Papadimitropoulos, F. Rustichelli, and R. Cancedda, "Kinetics of in Vivo Bone Deposition by Bone Marrow Stromal Cells into Porous Calcium Phosphate Scaffolds: An X-Ray Computed Microtomography Study", Tissue Eng, vol. 12, no. 12, pp. (3449-3458), 2006.
  147. [SARR-06b] D. Sarrut, D. Perol, P. Pommier, and C. Carrie, "Radiothérapie avec blocage respiratoire pour les grands insuffisants respiratoires atteints d'un carcinome pulmonaire non à petites cellules (Protocole RESPI 2000) : application à la modélisation des déformations d'organes par recalage déformable", Cancer/radiothérapie Elsevier, vol. 10, no. 6-7, pp. 377–380, 2006 .
  148. [APOS-06] L. Apostol, V. Boudousq, O. Basset, C. Odet, S. Yot, J. Tabary, J. M. Dinten, E. Boller, P. O. Kotzki, and F. Peyrin, "Relevance of 2D radiographic texture analysis for the assessment of 3D bone micro-architecture", Med Phys, vol. 33, no. 9, pp. 3546-3556, 2006 .
  149. [SARR-06c] D. Sarrut, V. Boldea, S. Miguet, and C. Ginestet, "Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans", Med Phys, vol. 33, no. 3, pp. 605-617, 2006 .
  150. [RAUM-06b] K. Raum, I. Leguerney, F. Chandelier, M. Talmant, A. Saied, F. Peyrin, and P. Laugier, "Site-matched assessment of structural and tissue properties of cortical bone using scanning acoustic microscopy and synchrotron radiation muCT", Phys Med Biol, vol. 51, no. 3, pp. 733-746, 2006 .
  151. [CHAP-06b] C. Chappard, F. Peyrin, A. Bonnassie, G. Lemineur, B. Brunet-Imbault, E. Lespessailles, and C. L. Benhamou, "Subchondral Bone Micro-Architectural Changes In Osteoarthritis : a Synchrotron Micro-Computed Tomography Study", Osteoarthritis Cartilage, vol. 14, no. 3, pp. 215-223, 2006.
  152. [LAST-05] D. Last, F. Peyrin, and G. Guillot, "Accuracy of 3D MR microscopy for trabecular bone assessment: a comparative study on calcaneus samples using 3D synchrotron radiation microtomography", Magma, pp. 1352-8661, 2005.
  153. [LAUG-05] P. Laugier, F. Padilla, F. Peyrin, K. Raum, A. Saied, M. Talmant, and L. Vico, "Apport des ultrasons dans l'exploration du tissu osseux", Innov Tech Biol Med - RBM, vol. 26, no. 5-6, pp. 299-311, 2005.
  154. [PEYR-05c] F. Peyrin, G. Boivin, and P. Braillon, "Bone microarchitecture in human foetuses", Clinical Cases in Mineral and Bone Metabolism, vol. 2, no. 2, pp. 150-157, 2005.
  155. [RAUM-05a] K. Raum, I. Leguerney, F. Chandelier, E. Bossy, M. Talmant, A. Saied, F. Peyrin, and P. Laugier, "Bone microstructure and elastic tissue properties are reflected in QUS axial transmission measurements", Ultrasound Med Biol, vol. 31, no. 9, pp. 1225-1235, 2005.
  156. [BAYA-05] S. Bayat, L. Apostol, E. Boller, T. Brochard, and F. Peyrin, "In vivo imaging of bone micro-architecture in mice with 3D synchrotron radiation microtomography", Nucl Instr Meth Phys Res A, vol. 548, pp. 247-252, 2005.
  157. [SARR-05] D. Sarrut, V. Boldea, M. Ayadi, J. N. Badel, C. Ginestet, and S. Clippe, "Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer", Int J Radiat Oncol Biol Phys, vol. 61, no. 2, pp. 594–607, 2005 .
  158. [FOLL-05] H. Follet, K. Bruyère-Garnier, F. Peyrin, J. P. Roux, M. E. Arlot, B. Burt-Pichat, C. Rumelhart, and P. J. Meunier, "Relationship between compressive properties of human os calcis and microarchitecture assessed from 2D and 3D synchrotron microtomography", Bone, pp. 340–351, 2005.
  159. [BOSS-05a] E. Bossy, F. Padilla, F. Peyrin, and P. Laugier, "Three-dimensional simulation of ultrasound propagation through trabecular bone structures measured by synchrotron microtomography", Phys Med Biol, vol. 50, no. 23, pp. 5545-5556, 2005.
  160. [MAST-05] M. Mastrogiacomo, A. Muraglia, V. Komlev, F. Peyrin, F. Rustichelli, A. Crovace, and R. Cancedda, "Tissue engineering of bone: search for a better scaffold", Orthod Craniofacial Res, vol. 8, no. 4, pp. 277-284, 2005.
  161. [BOUS-04] V. Bousson, F. Peyrin, C. Bergot, M. Hausard, A. Sautet, and J. D. Laredo, "Cortical bone of the human femoral neck : three-dimensional appearance and porosity using synchrotron radiation", J Bone Min Research, vol. 19, no. 5, pp. 794-801, 2004.
  162. [BOSS-04a] E. Bossy, M. Talmant, F. Peyrin, L. Akrout, P. Cloetens, and P. Laugier, "An In Vitro Study of the Ultrasonic Axial Transmission Technique at the Radius: 1-MHz Velocity Measurements Are Sensitive to Both Mineralization and Intracortical Porosity", J Bone Min Research, vol. 19, no. 9, pp. 1548-1556, 2004.
  163. [CLAR-04] P. Clarysse, F. Frouin, M. Garreau, A. Lalande, H. Rousseau, D. Sarrut, and C. Vasseur, "Intégration de connaissances et modélisation en imagerie médicale", Innov Tech Biol Med - RBM, vol. 25, no. 3, pp. 139-149, 2004 .
  164. [MAST-04] M. Mastrogiacomo, V. Komlev, M. Hausard, F. Peyrin, F. Turquier, S. Casari, A. Cedola, F. Rustichelli, and R. Cancedda, "X-ray microtomography for tissue engineering constructs", Tissue Eng, pp. 1767-1774, 2004.
  165. [MART-03b] E. Martin-Badosa, D. Amblard, S. Nuzzo, A. Elmoutaouakkil, L. Vico, and F. Peyrin, "Excised bone structures in mice: imaging at three-dimensional synchrotron radiation micro CT", Radiology, vol. 229, no. 3, pp. 921-928, 2003.
  166. [HENG-03] S. Hengsberger, J. Enstroem, F. Peyrin, and P. Zysset, "How is the indentation modulus of bone tissue related to its macroscopic elastic response? A validation study", J Biomech, vol. 36, no. 10, pp. 1503-1509, 2003.
  167. [MART-03a] E. Martin-Badosa, A. Elmoutaouakkil, S. Nuzzo, D. Amblard, L. Vico, and F. Peyrin, "A method for the automatic characterization of bone architecture in 3D mice microtomographic images", Comput Med Imag Grap, vol. 27, no. 6, pp. 447-458, 2003.
  168. [NUZZ-03] S. Nuzzo, C. Meneghini, P. Braillon, R. Bouvier, S. Mobilio, and F. Peyrin, "Microarchitectural and physical changes during foetal growth in human vertebral bone", J Bone Min Research, vol. 18, no. 4, pp. 760-768, 2003.
  169. [BONN-03a] A. Bonnassie, F. Peyrin, and D. Attali, "A new method for analyzing local shape in three-dimensional images based on medial axis transformation", IEEE Trans Sys Man Cyber, vol. 44, no. 4, pp. 700-705, 2003.
  170. [CLIP-03] S. Clippe, D. Sarrut, C. Malet, S. Miguet, C. Ginestet, and C. Carrie, "Patient setup error measurement using 3D intensity-based image registration techniques", Int J Radiat Oncol Biol Phys, vol. 56, no. 1, pp. 259–263, aug, 2003 .
  171. [PADI-03] F. Padilla, F. Peyrin, and P. Laugier, "Prediction of backscatter coefficient in trabecular bone using a numerical model of 3D micro-structure", J Acoust Soc Am, vol. 113, no. 2, pp. 1122-1129, 2003.
  172. [ROBI-03] M. Robini, and I. E. Magnin, "Stochastic nonlinear image restoration using the wavelet transform", IEEE Trans Image Proces, vol. 12, no. 8, pp. 890-905, 2003.
  173. [ELMO-03] A. Elmoutaouakkil, G. Fuchs, P. Bergounhon, R. Perez Cano, and F. Peyrin, "Three-dimensional quantitative analysis of polymer foams from Synchrotron radiation X-ray microtomography", J Appl Phys, vol. 36, pp. A37-A43, 2003.
  174. [CLOE-02] P. Cloetens, W. Ludwig, E. Boller, F. Peyrin, M. Schlenker, and J. Baruchel, "3D imaging using coherent synchrotron radiation", Image Anal Stereol, vol. 21, no. S1, pp. 75, 2002.
  175. [REVO-02a] C. Revol-Muller, F. Peyrin, Y. Carillon, and C. Odet, "Automated 3D region growing algorithm based on an assessment function", Pattern Recogn Lett, vol. 23, no. 1-3, pp. 137–150, 2002.
  176. [REVO-02b] C. Revol-Muller, H. Benoit-Cattin, Y. Carillon, C. Odet, A. Briguet, and F. Peyrin, "Bone MRI segmentation assessment based on synchrotron radiation computed microtomography", IEEE Trans Nucl Sci, vol. 49, no. 1, pp. 220–224, 2002.
  177. [NUZZ-02c] S. Nuzzo, F. Peyrin, P. Cloetens, J. Baruchel, and G. Boivin, "Quantification of the degree of mineralization of bone in three dimension using synchrotron radiation microtomography", Med Phys, vol. 19, no. 11, pp. 2672–2681, 2002.
  178. [ELMO-02] A. Elmoutaouakkil, F. Peyrin, J. Elkafi, and A. M. Laval-Jeantet, "Segmentation of cancellous bone from high resolution computed tomography images : Influence on trabecular bone measurements", IEEE Trans Med Imaging, vol. 21, no. 4, pp. 354–362, 2002.
  179. [NUZZ-02b] S. Nuzzo, M. H. Lafage-Proust, E. Martin-Badosa, G. Boivin, T. Thomas, C. Alexandre, and F. Peyrin, "Synchrotron radiation microtomography allows the analysis of three-dimensional micro-architecture and degree of mineralization of human Iliac Crest biopsies : effects of Etidronate treatment", J Bone Min Research, vol. 17, no. 8, pp. 1372–1382, 2002.
  180. [CHAF-02] S. Chaffai, F. Peyrin, S. Nuzzo, R. Porcher, G. Berger, and P. Laugier, "Ultrasonic characterization of human cancellous bone using transmission and backscatter measurements : relationships to density and micro-structure", Bone, vol. 30, no. 1, pp. 229–237, 2002.
  181. [NUZZ-01a] S. Nuzzo, F. Peyrin, E. Martin-Badosa, M. H. Lafage-Proust, and G. Boivin, "Assessment of bone mineral content from 3D Synchrotron radiation microtomography images", IEEE Trans Nucl Sci, vol. 48, no. 3/2, pp. 859–863, 2001.
  182. [BERG-01] C. Bergot, A. M. Laval-Jeantet, M. Hutchinson, I. Dautraix-Ricard, F. Caulin, and H. K. Genant, "A comparison of spinal quantitative Computed Tomography with dual energy X-Ray absorptiometry in european women with vertebral and nonvertebral fractures", Calcif Tissue Int, vol. 68, no. 2, pp. 74-82, 2001.
  183. [BOUS-01] V. Bousson, A. Meunier, C. Bergot, E. Vicaut, M. A. Rocha, M. H. Morais, A. M. Laval-Jeantet, and J. D. Laredo, "Distribution of intracortical porosity in human midfemoral cortex by age and gender", J Bone Min Research, vol. 17, no. 7, pp. 1308–1317, 2001.
  184. [PEYR-01a] F. Peyrin, "Point sur les perspectives technologiques d'analyse de la microarchitecture osseuse", Innov Tech Biol Med, vol. 22, no. 5, pp. 5–14, 2001.
  185. [CHAF-01] S. Chaffai, V. Roberjot, F. Peyrin, G. Berger, and P. Laugier, "Variation en fréquence du coefficient de rétrodiffusion ultrasonore de l'os trabéculaire : modélisation théorique et résultats expérimentaux", Innov Tech Biol Med, vol. 22, pp. 216-226, 2001.
  186. [BOUS-00] V. Bousson, C. Bergot, A. Meunier, C. Parlier-Cuau, A. M. Laval-Jeantet, and J. D. Laredo, "CT of the middiaphyseal femur : cortical bone mineral density and relation to porosity", Radiology, vol. 217, no. 1, pp. 179–187, 2000.
  187. [CHAF-00] S. Chaffai, V. Roberjot, F. Peyrin, G. Berger, and P. Laugier, "Frequency dependence of ultrasonic backscattering in cancellous bone: autocorrelation model and experimental results", J Acoust Soc Am, vol. 108, no. 5, pp. 2403–2411, 2000.
  188. [BENT-00] D. P. Bentz, D. A. Quenard, H. M. Kunzel, J. Baruchel, F. Peyrin, N. Martys, and E. J. Garboczi, "Microstructure and transport properties of porous building materials. ii: three-dimensional x-ray tomographic studies", Mater Struct, vol. 33, no. 227, pp. 147–153, 2000.
  189. [PEYR-00a] F. Peyrin, M. Salome-Pateyron, S. Nuzzo, P. Cloetens, A. M. Laval-Jeantet, and J. Baruchel, "Perspectives in three-dimensional analysis of bone samples using synchrotron radiation microtomography", Cell Mol Biol, vol. 46, no. 6, pp. 1089–1102, 2000.
  190. [SALO-99] M. Salome-Pateyron, F. Peyrin, C. Odet, A. M. Laval-Jeantet, P. Cloetens, B. Baruchel, and P. Spanne, "A synchrotron radiation microtomography system for the analysis of trabecular bone samples", Med Phys, vol. 26, no. 10, pp. 2194–2204, 1999.
  191. [ZEGA-98a] N. Zegadi, F. Peyrin, and A. M. Laval-Jeantet, "Application d'une méthode temps-fréquence à l'analyse de textures orientées d'images radiologiques vertébrales", Innov Tech Biol Med, vol. 19, no. 3, pp. 221-228, 1998.
  192. [PEYR-98a] F. Peyrin, M. Salomé-Pateyron, P. Cloetens, A. M. Laval-Jeantet, E. Ritman, and P. Ruegsegger, "Micro-CT examinations of trabecular bone samples at different resolutions : 14, 7 and 2 micron level", Technol Health Care, vol. 6, pp. 391-401, 1998.
  193. [LAUR-98] C. Laurent, F. Peyrin, J. M. Chassery, and M. Amiel, "Parallel image reconstruction on MIMD computers for three dimensional cone beam tomography, Special issue on Biomedical Applications", Parallel Computing, vol. 24, pp. 1461-1479, 1998.
  194. [LAVA-97c] A. M. Laval-Jeantet, A. Elmoutaouakkil, J. P. Roux, G. Lowet, J. P. Houssard, G. Peix, and F. Peyrin, "CT and mini-CT 2D-image analysis for the quantification of vertebral trabecular architecture", Stud Health Technol Inform, vol. 40, pp. 113-119, 1997.
  195. [LAPI-97c] A. Lapillonne, P. Braillon, P. D. Delmas, and B. L. Salle, "Dual energy X-ray absorptiometry in early life", Biol Neonate, vol. 48S, pp. 43–49, 1997.
  196. [LAUG-97] P. Laugier, P. Droin, A. M. Laval-Jeantet, and G. Berger, "In vitro assessment of the relationship between acoustic properties and bone mass density of the calcaneus by comparison of ultrasound parametric imaging and quantitative computed tomography", Bone, vol. 20, pp. 157-165, 1997.
  197. [PEYR-97d] F. Peyrin, M. Salome-Pateyron, A. M. Laval-Jeantet, G. Gimenez, and J. Baruchel, "Microtomographie 3D par rayonnement synchrotron : application à l'étude de l'architecture osseuse", Bul Soc Fr Phys, vol. 109, pp. 4–6, 1997.
  198. [LAVA-97e] A. M. Laval-Jeantet, A. Elmoutaouakkil, J. P. Roux, G. Lowet, X. Cheng, C. Bergot, and F. Peyrin, "Parameters of the vertebral bone structure calculated from standard and HR tomographs", IEEE Eng Med Biol, vol. 8, no. 2, pp. 761, 1997.
  199. [LAPI-97b] A. Lapillonne, P. Braillon, O. Claris, P. S. Ho, P. D. Delmas, and B. L. Salle, "Use of dual energy X-ray absorptiometry for the measurements of small quantities of mineral", Biol Neonate, vol. 71, pp. 198-201, 1997.
  200. [KAFT-96c] V. Kaftandjian, G. Peix, D. Babot, and F. Peyrin, "High resolution X-Ray Computed Tomography using a solid state linear detector", J X Ray Sc Technol, vol. 6, pp. 94-106, 1996.
  201. [PEAR-95a] J. Pearson, J. Dequeker, J. Reeve, D. Felsenberg, M. Henley, J. Bright, M. Lunt, J. Adams, M. Curiel Diaz, F. Galan, et al., "Dual X-ray absorptiometry of the proximal femur : normal European values standardized with the European spine phantom", J Bone Min Research, vol. 10, no. 10, pp. 315-324, 1995.
  202. [LAVA-95] A. M. Laval-Jeantet, C. Bergot, M. Williams, K. Davidson, and M. Laval-Jeantet, "Dual-Energy X-ray absorptiometry of the calcaneus : comparison with vertebral dual-energy X-ray absorptiometry and quantitative computed tomography", Calcif Tissue Int, vol. 56, pp. 14-18, 1995.
  203. [PEAR-95b] J. Pearson, J. Dequeker, M. Henley, J. Bright, J. Reeve, W. Kalender, and A. M. Laval-Jeantet, "European semi-anthropomorphic spine phantom for the calibration of bone desitometers : assessment of precision, stability and accuracy (the European Quantitation of osteoporosis study group)", Osteoporosis Int, vol. 5, no. 3, pp. 174-184, 1995.
  204. [ZHU-95b] Y. M. Zhu, V. Kaftandjian, G. Peix, and D. Babot, "Modulation transfer function evaluation of linear solid state X-ray sensitive detectors using edge techniques", Appl Opt, vol. 34, no. 22, pp. 4937-4943, 1995.
  205. [PEYR-94f] F. Peyrin, J. P. Houssard, E. Maurincomme, G. Peix, R. Goutte, A. M. Laval-Jeantet, and M. Amiel, "3D display of high resolution vertebral structure images", Clin Rheum, vol. 13, pp. 18-21, 1994.
  206. [FEBE-94] J. Feber, P. Cochat, P. Braillon, F. Castelo, X. Martin, C. Glastre, F. Chapuis, L. David, and P. J. Meunier, "Bone mineral density after renal transplantation in children", J Pediatr, vol. 125, pp. 870-875, 1994.
  207. [LAPI-94] A. Lapillone, F. H. Glorieux, B. L. Salle, P. Braillon, M. Chambon, J. Rigo, G. Putet, and J. Senterre, "Mineral balance and whole body bone mineral content in very low-birth-weight infants", Acta Paediatr, vol. S405, pp. 117-122, 1994.
  208. [DUFA-94] X. Dufaure De Citres, Y. Brechet, L. P. Kubin, and P. Braillon, "Numerical modelling of the evolution of the architecture of trabecular bone: damage accumulation and failure", Modelling Simul Mater Sci Eng, vol. 2, pp. 135-146, 1994.
  209. [PEYR-93b] F. Peyrin, J. P. Houssard, E. Maurincomme, G. Peix, R. Goutte, A. M. Laval-Jeantet, and M. Amiel, "3D display of high resolution vertebral structure images", Comput Med Imag Grap, vol. 17, no. 4 5, pp. 251–256, 1993.
  210. [LAVA-93b] A. M. Laval-Jeantet, H. K. Genant, C. Y. Wu, C. C. Gluer, K. G. Faulkner, and P. Steiger, "Factors influencing long-term in vivo reproductibility of QCT (Vertebral Densitometry)", J Comput Assist Tomogr, vol. 17, no. 6, pp. 915-921, 1993.
  211. [BERG-93a] C. Bergot, A. M. Laval-Jeantet, M. Laval-Jeantet, and D. Kuntz, "Mesure de la densité osseuse vertébrale : tomodensitométrie quantitative ou absorptiométrie biphotonique ?", Radiology, vol. 74, pp. 195-204, 1993.
  212. [DEQU-93] J. Dequeker, J. Reeve, J. Pearson, J. Bright, D. Felsenberg, W. Kalender, C. Langton, A. M. Laval-Jeantet, P. Ruegsegger, and G. Van Der Perre, "Multicenter european COMAC-BME study on the standardisation of bone densotometryprocedures", Technol Health Care, pp. 127-131, 1993.
  213. [CHEV-92] F. Chevalier, A. M. Laval-Jeantet, M. Laval-Jeantet, and C. Bergot, "CT Image analysis of the vertebral trabecular network in viv", Calcif Tissue Int, vol. 51, pp. 8-13, 1992.
  214. [LALA-92] J. D. Lalau, J. M. Achard, P. Bataille, C. Bergot, I. Jans, B. Boudaillez, J. Petit, C. Henon, P. F. Westeel, N. El Esper, et al., "Densité vertébrale des lithiasiques hypercalciuriques", Ann Méd Int, vol. 143, no. 5, pp. 293-298, 1992.
  215. [LAVA-92] A. M. Laval-Jeantet, L. Miravet, F. Chevalier, C. Bergot, and M. Laval-Jeantet, "Quantitative CT Image Analysis for the evaluation of fluoride treatment in osteoporosis", Radiology, vol. 185, pp. 292, 1992.
  216. [BATA-91] P. Bataille, J. M. Achard, A. Fournier, B. Boudalliez, P. F. Westeel, C. Bergot, J. D. Lalau, J. Petit, C. Henon, A. M. Laval-Jeantet, et al., "Diet, vitamin D vertebral mineral density in hypercalciuric calcium stone formers", Kidney Int, vol. 39, pp. 1193–1205, 1991.
  217. [BERG-91a] C. Bergot, and A. M. Laval-Jeantet, "Les méthodes d'évaluation du vieillissement osseux humain", Actual Gérontol, no. sp.ed, pp. 31-46, 1991.
Conference Paper
  1. [TOMA-13a] A. Toma, B. Sixou, L. Denis, J. B. Pialat, and F. Peyrin, "Higher order total variation super-resolution from a single trabecular bone image", ICIP 2013, Melbourne, Australia, Submitted.
  2. [SIXO-13b] B. Sixou, A. Toma, L. Denis, and F. Peyrin, "Iterative choice of the optimal regularization parameter in TV image deconvolution", New Computational Methods for Inverse Problems (NCMIP) 2013, Cachan, France, Submitted.
  3. [VARG-13] P. Varga, A. Pacureanu, M. Langer, H. Suhonen, B. Hesse, Q. Grimal, P. Cloetens, K. Raum, and F. Peyrin, "THE 3D ORIENTATION OF MINERALIZED COLLAGEN FIBRILS IN HUMAN LAMELLAR BONE AND ITS MECHANICAL CONSEQUENCES", 19th Congress of the European Society of Biomechanics, In Press.
  4. [VARG-13b] P. Varga, A. Pacureanu, M. Langer, B. Hesse, F. Peyrin, and K. Raum, "Case specific finite element analysis of the strains experienced by osteocytes", V International Conference on Computational Bioengineering, In Press.
  5. [LANG-13c] M. Langer, B. Hesse, A. Pacureanu, H. Suhonen, P. Cloetens, K. Raum, and F. Peyrin, "Extending validity of X-ray in-line phase tomography to heterogeneous objects", Gretsi 2013, In Press.
  6. [LANG-13d] M. Langer, P. Cloetens, B. Hesse, H. Suhonen, A. Pacureanu, K. Raum, and F. Peyrin, "Design of priors for X-ray in-line phase tomography", International Symposium on Biomedical Imaging - ISBI2013, 2013.
  7. [DONG-13] P. Dong, S. Haupert, P. J. Gouttenoire, and F. Peyrin, "Efficient Extraction of 3D Bone Cells Descriptors from Micro-CT Images", ISBI 2013, San Francisco, USA, 2013.
  8. [DELM-13a] V. Delmon, J. Vandemeulebroucke, R. Pinho, M. Vila Oliva, D. Sarrut, and S. Rit, "In-room breathing motion estimation from limited projection views using a sliding deformation model", International Conference on the Use of Computers in Radiation Therapy (ICCR), 2013.
  9. [LANG-13b] M. Langer, B. Hesse, A. Pacureanu, H. Suhonen, P. Cloetens, K. Raum, and F. Peyrin, "Priors for X-ray in-line phase tomography of heterogeneous objects ", Swedish Symposium on Image Analysis - SSBA 2013, 2013.
  10. [RIT-13a] S. Rit, M. Vila Oliva, S. Brousmiche, R. Labarbe, D. Sarrut, and G. C. Sharp, "The Reconstruction Toolkit (RTK), an open-source cone-beam CT reconstruction toolkit based on the Insight Toolkit (ITK)", International Conference on the Use of Computers in Radiation Therapy (ICCR), 2013.
  11. [SIXO-12b] B. Sixou, V. Davidoiu, M. Langer, and F. Peyrin, "Absorption and phase retrieval in phase contrast imaging with non linear Tikhonov regularization", New Computational Methods for Inverse Problems, Paris,France, pp. Series 386 (2012) 012012, 09/2012 .
  12. [SIXO-12c] S. SIXOU, and F. Peyrin, "Bone discrete tomography with convex-concave and non local regularization", IEEE International Symposium on Biomedical Imaging ISBI 2012, pp. 1443-1446, 2012.
  13. [RIT-12] S. Rit, N. Freud, D. Sarrut, and J. - M. Létang, "Distance-driven binning for proton CT filtered backprojection along most likely paths", Second International Conference on Image Formation in X-Ray Computed Tomography, Salt Lake City, USA, 2012 .
  14. [GUETH-12] P. Gueth, L. Grevillot, D. Dauvergne, N. Freud, J. M. Létang, C. Ray, E. Testa, and D. Sarrut, "Gate simulation of a complete proton treatment combined with prompt-gamma monitoring", IEEE Medical Imaging Conference, Anaheim, USA, 2012 .
  15. [BERT-12] J. Bert, H. Perez-Ponce, S. Jan, E. Z. Bitar, G. P., V. Cuplov, H. Chekatt, D. Benoit, D. Sarrut, Y. Boursier, et al., "Hybrid GATE: A GPU/CPU implementation for imaging and therapy applications", IEEE Medical Imaging Conference, Anaheim, USA, 2012 .
  16. [SARR-12] D. Sarrut, L. Claude, S. Rit, R. Pinho, G. Pitson, and R. Lynch, "Investigating mediastinal lymph node stations segmentation on thoracic CT following experts guidelines", MICCAI, Proceedings of the First International Workshop on Image-Guidance and Multimodal Dose Planning in Radiation Therapy, Nice, France, 2012 .