[Vv] Fwd: Bug in clitkDicom2Image

[Benoît Presles]

Dear Thomas,

Did you have time to have a look at the bug ?

Best regards,
Ben


Le 11/12/2018 à 15:25, Benoît Presles a écrit :
> Dear Thomas,
>
> I have updated my version of clitk and a bug I had before reappeared!
> clitkDicom2Image does not take into account the transformation in the 
> dicom header (Image Orientation (Patient) tag in the dicom header) 
> even with the -p option (open the image with patient coordinate system).
> Similarly, when I open the dicom image with vv (vv-->Open Dicom), the 
> transformation is not taken into account.
>
> In a previous version of vv, the transformation was correctly taken 
> into account.
>
>
> Thanks for your help,
> Best regards,
> Ben
>
>
>
> Le 24/07/2017 à 16:50, Thomas BAUDIER a écrit :
>> Hi Benoit,
>>
>> I just came back from hollidays and I see your bug.
>> Thank you to your support, I checked your files and I validated your 
>> modifications.
>> So they are available on the git.
>>
>> Best
>> Thomas
>>
>> On 2017-07-20 20:21, Benoît Presles wrote:
>>> Dear vv users,
>>>
>>> Please find attached the fix I did.
>>>
>>> Best regards,
>>> Ben
>>>
>>>
>>> -------- Message transféré --------
>>> Sujet :     Bug in clitkDicom2Image
>>> Date :     Wed, 12 Jul 2017 09:39:24 +0200
>>> De :     Benoît Presles <benoit.presles at u-bourgogne.fr>
>>> Pour :     vv at creatis.insa-lyon.fr
>>>
>>>
>>>
>>> Dear Thomas,
>>>
>>> I think there is a bug in the clitkDicom2Image tool. clitkDicom2Image
>>> does not take into account the transformation in the dicom header
>>> (Image Orientation (Patient) tag in the dicom header).
>>> Indeed, the same two images, the first one in "dicom format"
>>> (vv-->Open Dicom) and the other in "image format" generated thanks to
>>> clitkDicom2Image, do not overlap.
>>>
>>> You can download my test data here:
>>> https://cloud.u-bourgogne.fr/index.php/s/dNkQJuvXepdmx7e. You will
>>> find a dicom image with an orientation and the corresponding image
>>> generated thanks to clitkDicom2Image.
>>>
>>>
>>> Thanks for your help,
>>> Best regards,
>>> Ben
>> _______________________________________________
>> vv mailing list
>> vv at creatis.insa-lyon.fr
>> http://www.creatis.insa-lyon.fr/mailman/listinfo/vv
>
>
> _______________________________________________
> vv mailing list
> vv at creatis.insa-lyon.fr
> https://www.creatis.insa-lyon.fr/mailman/listinfo/vv