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 * Boldea V., Sharp G., Jiang S and Sarrut D. 4D-CT lung motion estimation with deformable registration: quantification of motion nonlinearity and hysteresis''. Med Phys. A paraitre. '''2008'''. ''
 * Wu Z., Rietzel E., Boldea V., Sarrut D. and Sharp G. Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations''. Medical physics, 35(2):775-781. '''2008'''. '' [attachment:wu-medphys2008.pdf]
 * Sarrut, D., Delhay, B., Villard, PF., Boldea, V., Beuve, M., Clarysse, P. A comparison framework for breathing motion estimation methods from 4D imaging''. IEEE Transactions on Medical Imaging, 26(12):1636–1648. '''2007'''. [attachment:dsarrut-tmi2007.pdf pdf] ''
 * Sarrut, D. Deformable Registration for Image-Guided Radiation Therapy''. Zeitschrift für Medizinische Physik, 16(4):285-297. '''2006'''. [attachment:sarrut-zmedphys2006.pdf pdf] (see also [http://elsevier.isoftmedia.de/rechts.php?/lan~ger/site~journalo2/journal~2/name~16_4.html here], or a long version [attachment:sarrut-zmedphys2006-long-version.pdf pdf]) ''
 * Atoui, H., Miguet, S. and Sarrut, D. A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy''. Image Analysis and Stereology, 25(2):95-103. '''2006'''. [attachment:atoui-ias2006.pdf pdf] (see also [http://www.wise-t.com/ias/article.php?id=187&year=2006&issue=6 here]) ''
 * Boldea V., Sharp G., Jiang S and Sarrut D. ''4D-CT lung motion estimation with deformable registration: quantification of motion nonlinearity and hysteresis''. Med Phys. A paraitre. '''2008'''. ''
 * Wu Z., Rietzel E., Boldea V., Sarrut D. and Sharp G. ''Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations''. Medical physics, 35(2):775-781. '''2008'''. '' [attachment:wu-medphys2008.pdf]
 * Sarrut, D., Delhay, B., Villard, PF., Boldea, V., Beuve, M., Clarysse, P. ''A comparison framework for breathing motion estimation methods from 4D imaging''. IEEE Transactions on Medical Imaging, 26(12):1636–1648. '''2007'''. [attachment:dsarrut-tmi2007.pdf pdf] ''
 * Sarrut, D. ''Deformable Registration for Image-Guided Radiation Therapy''. Zeitschrift für Medizinische Physik, 16(4):285-297. '''2006'''. [attachment:sarrut-zmedphys2006.pdf pdf] (see also [http://elsevier.isoftmedia.de/rechts.php?/lan~ger/site~journalo2/journal~2/name~16_4.html here], or a long version [attachment:sarrut-zmedphys2006-long-version.pdf pdf]) ''
 * Atoui, H., Miguet, S. and Sarrut, D. ''A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy''. Image Analysis and Stereology, 25(2):95-103. '''2006'''. [attachment:atoui-ias2006.pdf pdf] (see also [http://www.wise-t.com/ias/article.php?id=187&year=2006&issue=6 here]) ''
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 * Sarrut, D., Boldea, V., Ayadi, M., Badel, J., Ginestet, C. and Clippe, S. ''Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer''. ''International Journal of Radiation Oncology Biology Physics'', 61(2):594-607. '''2005'''. [attachment:sarrut-ijrobp2005.pdf pdf] ''
 * Clippe, S., Sarrut, D., Malet, C., Miguet, S., Ginestet, C. and Carrie, C. Patient setup error measurement using 3D intensity-based image registration techniques''. ''International Journal of Radiation Oncology Biology Physics'', 56(1):259-263. '''2003'''. [attachment:sarrut-ijrobp-2003.pdf pdf] ''
 * Sarrut, D., Boldea, V., Ayadi, M., Badel, J., Ginestet, C. and Clippe, S. ''Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer''. International Journal of Radiation Oncology Biology Physics, 61(2):594-607. '''2005'''. [attachment:sarrut-ijrobp2005.pdf pdf] ''
 * Clippe, S., Sarrut, D., Malet, C., Miguet, S., Ginestet, C. and Carrie, C. ''Patient setup error measurement using 3D intensity-based image registration techniques''. International Journal of Radiation Oncology Biology Physics, 56(1):259-263. '''2003'''. [attachment:sarrut-ijrobp-2003.pdf pdf] ''

TableOfContents(3)

1. Articles in international journals

  • Sarrut D. and Guigues L. Region-oriented CT image representation for reducing computing time of Monte Carlo simulations. Med Phys. A paraitre. 2008. [attachment:dsarrut-medphys2008.pdf pdf]

  • Boldea V., Sharp G., Jiang S and Sarrut D. 4D-CT lung motion estimation with deformable registration: quantification of motion nonlinearity and hysteresis. Med Phys. A paraitre. 2008.

  • Wu Z., Rietzel E., Boldea V., Sarrut D. and Sharp G. Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations. Medical physics, 35(2):775-781. 2008. [attachment:wu-medphys2008.pdf]

  • Sarrut, D., Delhay, B., Villard, PF., Boldea, V., Beuve, M., Clarysse, P. A comparison framework for breathing motion estimation methods from 4D imaging. IEEE Transactions on Medical Imaging, 26(12):1636–1648. 2007. [attachment:dsarrut-tmi2007.pdf pdf]

  • Sarrut, D. Deformable Registration for Image-Guided Radiation Therapy. Zeitschrift für Medizinische Physik, 16(4):285-297. 2006. [attachment:sarrut-zmedphys2006.pdf pdf] (see also [http://elsevier.isoftmedia.de/rechts.php?/lan~ger/site~journalo2/journal~2/name~16_4.html here], or a long version [attachment:sarrut-zmedphys2006-long-version.pdf pdf])

  • Atoui, H., Miguet, S. and Sarrut, D. A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy. Image Analysis and Stereology, 25(2):95-103. 2006. [attachment:atoui-ias2006.pdf pdf] (see also [http://www.wise-t.com/ias/article.php?id=187&year=2006&issue=6 here])

  • Sarrut, D., Boldea, V., Miguet, S. and Ginestet, C. Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans. Medical physics, 33(3):605-617. 2006. [attachment:sarrut-medphys2006.pdf pdf]Anchor(MedPhys2006)

  • Sarrut, D., Boldea, V., Ayadi, M., Badel, J., Ginestet, C. and Clippe, S. Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer. International Journal of Radiation Oncology Biology Physics, 61(2):594-607. 2005. [attachment:sarrut-ijrobp2005.pdf pdf]

  • Clippe, S., Sarrut, D., Malet, C., Miguet, S., Ginestet, C. and Carrie, C. Patient setup error measurement using 3D intensity-based image registration techniques. International Journal of Radiation Oncology Biology Physics, 56(1):259-263. 2003. [attachment:sarrut-ijrobp-2003.pdf pdf]

2. Articles in national french journals

  • Sarrut, D., Perol, D., Pommier, P. and Carrie, C. Radiothérapie avec blocage respiratoire pour les grands insuffisants respiratoires atteints d'un carcinome pulmonaire non à petites cellules (Protocole RESPI 2000) : application à la modélisation des déformations d'organes par recalage déformable. Cancer/radiothérapie Elsevier. 10(6-7) :377–380. 2006. [attachment:sarrut-canrad2006.pdf pdf] [http://dx.doi.org/10.1016/j.canrad.2006.08.005 doi]

  • Rit, S., Sarrut, D., Boldea, V. and Ginestet, C. Extraction du signal respiratoire à partir de projections cone-beam pour l imagerie TDM 4D. Revue Traitement du Signal. 23(3-4) :307–319. 2006. [attachment:rit-ts2006.pdf pdf]

  • Clarysse, P., Frouin, F., Garreau, M., Lalande, A., Rousseau, J., Sarrut, D. and Vasseur., C. Intégration de Connaissances et Modélisation en Imagerie Médicale. ITBM-RBM Innovation et technologie en biologie et médecine, 25(3):139-149. 2004. [attachment:asicomim2004.pdf pdf]

3. Articles in international conferences with review committee (and invited papers)

  • Rit, S. and Sarrut, D. Cone-beam projection of a deformable volume for motion compensated algebraic reconstruction. In IEEE Engineering in Medicine and Biology Conference (EMBC), Lyon, France. 2007. [attachment:rit-sarrut-embc2007.pdf pdf]

  • Desbat, L., Rit, S., Clackdoyle, R., Mennessier, C., Promayon, E. and Ntalampeki, S. Algebraic and analytic reconstruction methods for dynamic tomography. In IEEE Engineering in Medicine and Biology Conference (EMBC), Lyon, France. 2007. [attachment:desbat-embc2007.pdf pdf]

  • Sarrut, D. Deformable registration and 4D cone-beam CT reconstruction. In Elekta 3rd European User’s Conference. Stiges, Spain. Invited paper. 2007. [attachment:Sarrut-Elekta-Stiges2007.pdf pdf]

  • Vandemeulebroucke, J., Sarrut, D. and Clarysse, P.The POPI-model, a point-validated pixel-based breathing thorax model. In XVth International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada. 2007. [attachment:ICCR2007_jef.pdf pdf]

  • Boldea, V., Sharp, G.C. , Jiang, S.B. and Sarrut, D. Lung motion modeling with deformable registration: non-linearity and hysteresis estimation and analysis. In XVth International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada. 2007. [attachment:ICCR2007_vlad.pdf pdf]

  • Rit, S., Sarrut, D. and Miguet, S. Gated cone-beam CT imaging of the thorax: a reconstruction study. In SPIE Medical Imaging: Physics of Medical Imaging. 2007. [attachment:rit-sarrut-spie2007.pdf pdf]

  • Rit, S., Sarrut, D. and Ginestet, C. Comparison of gated and dynamic cone-beam CT reconstruction methods. In XVth International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada. 2007. [attachment:rit-sarrut-iccr2007.pdf pdf]

  • Sarrut, D. Three imaging techniques for treatment of moving organs. In Heavy Charged Particles in Biology and Medicine. Oropa, Italy. Invited paper. 2005. [attachment:hcpbm2005.pdf pdf]

  • Rit, S., Sarrut, D. and Ginestet, C. Respiratory signal extraction for 4D CT imaging of the thorax from cone-beam CT projections. In J. Duncan and G. Gerig, editors, Medical Image Computing and Computer-Assisted Intervention MICCAI'2005, volume 3749, pages 556-63. Springer Verlag, Lecture Notes in Computer Science. 2005. [attachment:rit-sarrut-miccai2005.pdf pdf]

  • Boldea, V., Sarrut, D. and Carrie, C. Comparison of 3D Dense Deformable Registration Methods for Breath-hold Reproducibility Study in Radiotherapy. In SPIE Medical Imaging: Visualization, Image-Guided Procedures, and Display, volume 5747, pages 222-230. 2005. [attachment:boldea-spie2005.pdf pdf]

  • Atoui, H., Sarrut, D. and Miguet, S. Usefulness of image morphing techniques in cancer treatment by conformal radiotherapy. In SPIE Medical Imaging: Visualization, Image-Guided Procedures, and Display, volume 5367, pages 332-340. 2004. [attachment:atoui-spie2004.pdf pdf]

  • Boldea, V., Sarrut, D. and Clippe, S. Lung Deformation Estimation with Non-Rigid Registration for Radiotherapy Treatment. In Medical Image Computing and Computer-Assisted Intervention MICCAI'2003, volume 2878, pages 770-7. Springer Verlag, Lecture Notes in Computer Science. 2003. [attachment:boldea-sarrut-miccai2003.pdf pdf]

  • Sarrut, D. and Clippe, S. Geometrical transformation approximation for 2D/3D intensity-based registration of portal images and CT scan. In W. Niessen and M. A. Viergever, editors, Medical Image Computing and Computer-Assisted Intervention MICCAI'2001, volume 2208, pages 532-540. Springer Verlag, Lecture Notes in Computer Science, Utrecht (Netherlands). 2001. [attachment:sarrut-miccai2001.pdf pdf]

  • Teytaud, O. and Sarrut, D. Kernel Based Image Classification. In International Conference on Artificial Neural Networks (ICANN), pages 369-375. 2001. [attachment:sarrut-icann2001.ps.gz .ps.gz]

  • Teytaud, O. and Sarrut, D. Convergence speed of deformable models. In INNS-IEEE International Joint Conference on Neural Networks (IJCNN). 2001.

  • Sarrut, D. and Clippe, S. Patient positioning in radiotherapy by registration of 2D portal to 3D CT images by a contend-based research with similarity measures. In Computer Assisted Radiology and Surgery (CARS), pages 707-712. Elsevier Science, San Francisco, USA. 2000. [attachment:cars2000.ps.gz .ps.gz]

  • Sarrut, D. and Miguet, S. ARAMIS: A Remote Access Medical Imaging System. In 3rd International Symposium on Computing in Object-Oriented Parallel Environments, Lecture Notes in Computer Science, pages p 55-60. Springer-Verlag, San Francisco, USA. 1999. [attachment:iscope99.ps.gz ps.gz]

  • Sarrut, D. and Miguet, S. Fast 3D Images Transformations for Registration Procedures. In 10th International Conference on Image Analysis and Processing, pages 446-452. IEEE Computer Society, Venice, Italy. 1999. [attachment:iciap99.ps.gz ps.gz]

  • Sarrut, D. and Miguet, S. Similarity Measures for Image Registration. In European Workshop on Content-Based Multimedia Indexing, pages 263-270. IHMPT-IRIT, Toulouse, France. 1999. [attachment:cbmi99.ps.gz ps.gz]

  • Sarrut, D. and Feschet, F. he Partial Intensity Difference Interpolation. In H. R. Arabnia, editor, International Conference on Imaging Science, Systems and Technology, pages 46-51. CSREA Press, Las Vegas, USA. 1999. [attachment:cisst99.ps.gz .ps.gz]

  • Sarrut, D. ARAMIS: an on line Parallel Platform for Medical Imaging. In H. R. Arabnia, editor, International Conference on Parallel and Distributed Processing Technique and Applications, pages 509-516. CSREA Press, Las Vegas, USA. 1998. [attachment:pdpta98.ps.gz .ps.gz]

  • Miguet, S., Nicod, J. and Sarrut, D. A Linear Algorithm for constructing the Polygon Adjacency Relation in a Iso-Surface of 3D Images. In E. Ahronovitz and C. Fiorio, editors, International Conference on Discrete Geometry for Computer Imagery (DGCI) 1997, volume 1347 of Lecture Notes in Computer Science, pages 125-136. Springer-Verlag, Montpellier, France. 1997. [attachment:dgci97.ps.gz .ps.gz]

4. Abstracts in international conferences with review committee

  • Boldea, V., Sharp, G., Jiang, and Sarrut, D. Construction of 4D-CT motion model using deformable registration: comparison of Eulerian and Lagrangian approaches. In 49th American Association of Physicists in Medicine (AAPM) Annual Meeting. Minneapolis, MN, USA. 2007. [attachment:aapm2007_vlad.pdf pdf]

  • Badel, J., Ginestet, C., Dufour, N. and Sarrut, D. Monte Carlo simulations of the transit dose from amorphous silicon electronic portal images. In The 9th International Workshop on Electronic Portal Imaging. Melbourne, Australia. 2006. [attachment:badel-iwepid2006.pdf pdf]

  • Ayadi, M., Sarrut, D. and Ginestet, C. Cumulating static dose distributions to simulate dynamic dose distributions: an experimental study. In 48th American Association of Physicists in Medicine (AAPM) Annual Meeting. Orlando, FL, USA. 2006. [attachment:ayadi-aapm2006.pdf pdf]

  • Boldea, V., Sharp, G., Jiang, S., Choi, N., Ginestet, C., Carrie, C. and Sarrut, D. Implementation and Evaluation of Automatic Contour Propagation in 4DCT of Lung. In 48th American Association of Physicists in Medicine (AAPM) Annual Meeting. Orlando, FL, USA. 2006. [attachment:boldea-aapm2006.pdf pdf]

  • Boldea, V., Sarrut, D., Sharp, G., Jiang, S. and Choi, N. Study of Motion in a 4D-CT Using Deformable Registrations. In American Society for Therapeutic Radiology And Oncology (ASTRO). Denver, CO., USA. 2005. [attachment:astro2005_vboldea.pdf pdf]

  • Rit, S., Sarrut, D. and Ginestet, C. Respiratory signal extraction for 4D CT imaging of the thorax from cone-beam CT projections. In American Society for Therapeutic Radiology And Oncology (ASTRO). Denver, CO., USA. 2005. [attachment:astro2005-srit.pdf pdf]

  • Badel, J., Ginestet, C., N., D. and Sarrut, D. Monte Carlo simulation of the transit dose from amorphous silicon electronic portal images for treatment control in radiotherapy. In American Society for Therapeutic Radiology And Oncology (ASTRO). Denver, CO., USA. 2005. [attachment:astro2005-jnbadel.pdf pdf]

  • Sarrut, D., Boldea, V., Miguet, S. and Ginestet, C. Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans. In American Society for Therapeutic Radiology And Oncology (ASTRO). Denver, CO., USA. 2005. [attachment:astro2005-dsarrut.pdf pdf]

  • Ayadi, M., Boldea, V., Badel, J., Ginestet, C., Sarrut, D. and Carrie, C. Dosimetric consequences of GTV's residual displacements for patients treated with the ABC device. In The 4th S.Takahashi Memorial International Workshop on 3 Dimensional Conformal Radiotherapy. Nagoya, Japan. December 2004.

  • Pommier, P., Perol, D., Sarrut, D., Clippe, S., Claude, L., Gomez, F., Martel-Lafay, I., Vincent, M., Perol, M., Falcheroa, L., Etienne-Mastroianni, B., Ginestet, C. and Carrie, C. Active breathing control combined with high dose 3D conformal radiotherapy for non small cell lung cancer patients with severe respiratory insufficiency. Experience of the centre the Centre Léon Bérard. In The 4th S.Takahashi Memorial International Workshop on 3 Dimensional Conformal Radiotherapy. Nagoya, Japan. December 2004.

  • Sarrut, D., Boldea, V., Clippe, S., Ginestet, C. and Carrie, C. Non-rigid registration method to assess the reproducibility of breath-holding with ABC in lung cancer. In American Society for Therapeutic Radiology And Oncology (ASTRO). Atlanta, USA. 2004.

  • Clippe, S. and Sarrut, D. Patient positioning in radiotherapy. In 92nd Annual Meeting - American Association for Cancer Research. 2001.

5. Articles in national french conference with review committee

  • Ayadi, M., Sarrut, D., Boldea, V., Badel, J., Ginestet, C., Clippe, S. and Carrie, C. Reproductibilite du blocage respiratoire : évaluation 3D à l'aide d'algorithme de recalage non rigide d'images. In 43èmes Journées Scientifiques de la Société Française de Physique. Montpellier. 2004.

  • Badel, J., Sebban, M., Ginestet, C. and Sarrut, D. Contrôle du traitement en radiothérapie par l'utilisation de l'imagerie portale numérique : contrôle dosimétrique et du positionnement. In 43èmes Journées Scientifiques de la Société Française de Physique. Montpellier. 2004.

  • Clippe, S., Sarrut, D., Miguet, S. and Carrie, C. Aide au positionnement du patient en radiothérapie conformationnelle par l'usage de techniques de recalage d'images 2D/3D basées sur l'intensité des pixels. In 13ème Congrès de la SFRO. Paris. Best Poster Price. 2002.

  • Sarrut, D., Miguet, S., Vincent, F., Clarysse, P., Exbrayat, M., Brunie, L., Fleute, M., Desbat, L. and Magnin, I. Requêtes complexes et hybrides dans des bases d'images médicales distantes. Une illustration en imagerie cardiaque. In Premières rencontres des Sciences et Technologies de l'Information. 2001. [attachment:Asti2001SanteHPC.pdf pdf]

  • Sarrut, D. and Clippe, C. Positionnement de patient en radiothérapie par recalage 2D/3D sans segmentation. In Radiothérapie Assistée par l'Image (RAI 2001). Centre Antoine-Lacassagne, Nice. 2001.

  • Miguet, S., Sarrut, D. and Clippe, C. Positionnement de patient en radiothérapie conformationnelle. In Avancées et perspectives en matière de GMCAO (Gestes Médico-Chirurgicaux Assistés par Ordinateur). Grenoble. 2000. [attachment:gmcao2000.ps.gz .ps.gz]

  • Coeurjolly, D., Sarrut, D. and Tougne, L. Décimation en Imagerie Médicale 3D. In Courbes Surfaces et Algorithmes. Journées du Groupe de Travail "Modélisation Géométrique" 1999. [attachment:csa99.ps.gz .ps.gz], Grenoble, France.

6. Thesis

  • Rit, S. Prise en compte du mouvement respiratoire pour la reconstruction d’images tomodensitométriques, Ph.D. thesis, Université Lumière Lyon 2. 2007. [attachment:These_Simon_Rit.pdf pdf]

  • Boldea, V. Intégration de la respiration en radiothérapie : apport du recalage déformable d'images, Ph.D. thesis, Université Lumière Lyon 2. 2006. [attachment:These_Vlad_Boldea.pdf pdf]

  • Sarrut, D. Recalage multimodal et plate-forme d'imagerie médicale à accès distant. Ph.D. thesis, Université Lumière Lyon 2. 2000. [attachment:these-dsarrut.pdf pdf]