Postdoc fellowship: Exponential Data Consistency Conditions for Patient Motion Detection and Correction in SPECT
Recrutement: 
Sujet de Post-Doc
Recrutement en cours/passé: 
Recrutement passé
Periode: 
2022-2023
Contact: 
https://bit.ly/3uhilhW
Fichiers: 
PDF icon 2022_postdoc_creatis.pdf

Context

The ANR project SPECT-Motion-eDCC is a collaborative project between CREATIS, TIMC, OHI and LUMEN. Single photon emission computed tomography (SPECT) is a technique for imaging the 3D distribution of a radioactive tracer that has been administered to a patient to track certain biological functions. The long acquisition times (10-40 minutes) of SPECT make them prone to patient motion which decreases image quality. Exponential data consistency conditions (eDCC) are mathematical equations [1] that should be verified by the input data of SPECT reconstruction algorithms. Inconsistencies might be used to correct input data, e.g., to improve correction of the attenuation [2].

Objective

The goal of this postdoc fellowship is to implement motion correction in SPECT reconstruction using eDCC-based motion estimation. The investigations will start with Monte Carlo simulations of clinical SPECT scanners with a parallel collimator as those available at the LUMEN. Application to real data and pinhole SPECT will be investigated subsequently.

Tasks

  • Select patient data from which SPECT acquisitions will be simulated,
  • Simulate SPECT projections with patient motion using GATE,
  • Implement motion correction in SPECT reconstruction with RTK

Required skills

  • Education: PhD in applied mathematics, computer sciences or medical physics.
  • Scientific interests: applied mathematics, computer sciences (medical image processing), medical physics.
  • Programming skills: Python, C++ (ITK, RTK).
  • Languages: command of English required, French optional.

Practical information

  • Supervision: Simon Rit
  • Location: Mainly at the Centre Léon Bérard, Lyon, France.
  • Period: 1 year, starting as soon as possible.
  • Salary (net): depending on experience, starting 2100 euros/month.
  • Send CV and a brief statement of interest on https://bit.ly/3uhilhW

References

[1] V. Aguilar, L. Ehrenpreis, and P. Kuchment. Range conditions for the exponential Radon transform. Journal d’Analyse Mathématique, 68(1):1–13, 1996.

[2] R.G. Wells and R. Clackdoyle. Feasibility of attenuation map alignment in pinhole cardiac SPECT using exponential data consistency conditions. Med Phys, 48(9):4955–4965, 2021.