Retour à l'index des publications
Export 104 results:
Warning on RTF export
×
If you export in RTF and open your file with microsoft Word, you need to choose "Occidental (Windows Latin 1)" encoding.

Journal Article

  1. [COMM-18]“Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure”, Scientific Reports, vol. 869133541861714842334460201527102932142611011155734155, 2018.
    http://www.nature.com/articles/s41598-018-31911-7http://www.nature.com/articles/s41598-018-31911-7.pdfhttp://www.nature.com/articles/s41598-018-31911-7.pdfhttp://www.nature.com/articles/s41598-018-31911-7
  2. [GLA18]“Boutiques: a flexible framework for automated application integration in computing platforms”, GigaScience, vol. inpress, 2018.
  3. [HATT2018177]“The first MICCAI challenge on PET tumor segmentation”, Medical Image Analysis, vol. 44, pp. 177 - 195, 2018.
    http://www.sciencedirect.com/science/article/pii/S1361841517301895
  4. [GLAT-17]“Software architectures to integrate workflow engines in science gateways”, Future Generation Computer Systems, p. -, 2017.
    //www.sciencedirect.com/science/article/pii/S0167739X17300249
  5. [CAMA-16]S. Camarasu-Pop, Glatard, T., and Benoit-Cattin, H., “Combining Analytical Modeling, Realistic Simulation and Real Experimentation for the Optimization of Monte-Carlo Applications on the European Grid Infrastructure”, Future Generation Computer Systems, vol. 57, pp. 13-23, 2016.
  6. [DAS-16]S. Das, Glatard, T., MacIntyre, L. C., Madjar, C., Rogers, C., Rousseau, M., Rioux, P., MacFarlane, D., Mohaddes, Z., Gnanasekaran, R., Makowski, C., Kostopoulos, P., Adalat, R., Niso, G., Moreau, J., and Evans, A. C., “The MNI data-sharing and processing ecosystem”, Neuroimage, vol. 124-B, pp. 1188–1195, 2016.
    http://authors.elsevier.com/sd/article/S1053811915008009
  7. [GLAT-15a]T. Glatard, Lewis, L. B., Ferreira da Silva, R., Adalat, R., Beck, N., Lepage, C., Rioux, P., Rousseau, M., Sherif, T., Deelman, E., Khalili-Mahani, N., and Evans, A. C., “Reproducibility of neuroimaging analyses across operating systems”, Frontiers in Neuroinformatics, vol. 9, 2015.
    http://journal.frontiersin.org/article/10.3389/fninf.2015.00012/abstract
  8. [MA-15]J. Ma, Liu, W., and Glatard, T., “A stateful storage availability and entropy model to control storage distribution on grids”, Concurrency and Computation: Practice and Experience, vol. 27, p. 164--171, 2015.
  9. [REDO-15]A. Redolfi, Manset, D., Barkhof, F., Wahlund, L. O., Glatard, T., Mangin, J. F., and Frisoni, G. B., “Head-to-Head Comparison of Two Popular Cortical Thickness Extraction Algorithms: A Cross-Sectional and Longitudinal Study.”, PloS one, vol. 10, p. e0117692, 2015.
    http://www.plosone.org/article/Authors/info:doi/10.1371/journal.pone.0117692
  10. [GIBA-14]B. Gibaud, Forestier, G., Benoit-Cattin, H., Cervenansky, F., Clarysse, P., Friboulet, D., Gaignard, A., Hugonnard, P., Lartizien, C., Liebgott, H., Montagnat, J., Tabary, J., and Glatard, T., “OntoVIP: an ontology for the annotation of object models used for medical image simulation”, Journal of Biomedical Informatics, vol. 52, pp. 279-292, 2014.
  11. [SHER-14]T. Sherif, Rioux, P., Rousseau, M., Kassis, N., Beck, N., Adalat, R., Das, S., Glatard, T., and Evans, A. C., “CBRAIN: A web-based, distributed computing platform for collaborative neuroimaging research”, Frontiers in Neuroinformatics, vol. 8, 2014.
  12. [FERR-14]R. Ferreira da Silva, Glatard, T., and Desprez, F., “Controlling fairness and task granularity in distributed, online, non-clairvoyant workflow executions”, Concurrency and Computation: Practice and Experience, vol. 26, pp. 2347-2366, 2014.
  13. [GAIG-14]A. Gaignard, Montagnat, J., Gibaud, B., Forestier, G., and Glatard, T., “Domain-specific summarisation of Life-Science e-experiments from provenance traces”, Journal of Web Semantics, vol. 29, p. 19--30, 2014.
  14. [CAMA-13]S. Camarasu-Pop, Glatard, T., Ferreira da Silva, R., Gueth, P., Sarrut, D., and Benoit-Cattin, H., “Monte-Carlo Simulation on Heterogeneous Distributed Systems: a Computing Framework with Parallel Merging and Checkpointing Strategies”, Future Generation Computer Systems, vol. 29, p. 728--738, 2013.
    http://www.creatis.insa-lyon.fr/~dsarrut/articles/Camarasu-Pop2013.pdf
  15. [MA-13]J. Ma, Liu, W. Y., and Glatard, T., “A classification of file placement and replication methods on grids”, Future Generation Computer Systems, vol. 29, pp. 1395–1406, 2013.PDF icon fgcs-2011.pdf (599.24 KB)
  16. [FERR-13]R. Ferreira da Silva, Glatard, T., and Desprez, F., “Self-healing of workflow activity incidents on distributed computing infrastructures”, Future Generation Computer Systems, vol. 29, pp. 2284-2294, 2013.
    http://www.sciencedirect.com/science/article/pii/S0167739X1300126X
  17. [FENG-13]D. Feng, Germain-Renaud, C., and Glatard, T., “Efficient Distributed Monitoring with Active Collaborative Prediction”, Future Generation Computer Systems, vol. 29, pp. 2272–2283, 2013.
    http://www.sciencedirect.com/science/article/pii/S0167739X13001155
  18. [ROGE-13]D. Rogers, Harvey, I., Huu, T. T., Evans, K., Glatard, T., Kallel, I., Taylor, I., Montagnat, J., Jones, A., and Harrison, A., “Bundle and Pool Architecture for Multi-Language, Robust, Scalable Workflow Executions”, Journal of Grid Computing , vol. 11, pp. 457-480, 2013.
    http://link.springer.com/article/10.1007%2Fs10723-013-9267-2
  19. [GLAT-13]T. Glatard, Lartizien, C., Gibaud, B., Ferreira da Silva, R., Forestier, G., Cervenansky, F., Alessandrini, M., Benoit-Cattin, H., Bernard, O., Camarasu-Pop, S., Cerezo, N., Clarysse, P., Gaignard, A., Hugonnard, P., Liebgott, H., Marache, S., Marion, A., Montagnat, J., Tabary, J., and Friboulet, D., “A Virtual Imaging Platform for multi-modality medical image simulation”, IEEE Transactions on Medical Imaging, vol. 32, pp. 110-118, 2013.PDF icon tmi-2012.pdf (487.25 KB)
  20. [GLAT-11]T. Glatard and Camarasu-Pop, S., “A model of pilot-job resource provisioning on production grids”, Parallel Computing, vol. 37, pp. 684-692, 2011.PDF icon parco10.pdf (531.99 KB)
  21. [CAMA-10]S. Camarasu-Pop, Glatard, T., Moscicki, J. T., Benoit-Cattin, H., and Sarrut, D., “Dynamic partitioning of GATE Monte-Carlo simulations on EGEE”, Journal of Grid Computing, vol. 8, pp. 241-259, 2010.
    http://www.creatis.insa-lyon.fr/~dsarrut/articles/Camarasu-Pop2010.pdf
  22. [GLAT-10]T. Glatard, Soleman, S., Veltman, J., Nederveen, A., and Olabarriaga, S., “Large scale functional MRI study on a production grid”, Future Generation Computer Systems, vol. 26, pp. 685-692, 2010.PDF icon fgcs.pdf (361.7 KB)
    http://www.sciencedirect.com/science/article/pii/S0167739X09001137
  23. [OLAB-10]S. Olabarriaga, Glatard, T., and de Boer, P. T., “A Virtual Laboratory for Medical Image Analysis”, IEEE Transactions on Information Technology in Biomedicine, vol. 14, pp. 979-985, 2010.Package icon TITB-00320-2008-final.pdf.zip (4.51 MB)
    http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=5443468
  24. [LING-09a]D. Lingrand, Glatard, T., and Montagnat, J., “Modeling the latency on production grids with respect to the execution context”, Parallel Computing, vol. 35, pp. 493-511, 2009.PDF icon lingrand-glatard-etal_2009.pdf (1.13 MB)
    http://www.sciencedirect.com/science/article/pii/S0167819109000829
  25. [GLAT-08i]T. Glatard, Montagnat, J., Lingrand, D., and Pennec, X., “Flexible and efficient workflow deployment of data-intensive applications on grids with MOTEUR”, Journal of High Performance Computing and Applications, vol. 22, pp. 347–360, 2008.
    http://rainbow.polytech.unice.fr/publis/glatard-montagnat-etal:2008.pdf
  26. [GLAT-08j]T. Glatard, Montagnat, J., Emsellem, D., and Lingrand, D., “A Service-Oriented Architecture enabling dynamic services grouping for optimizing distributed workflows execution”, Future Gener Comp Sy, vol. 24, pp. 720–730, 2008.
    http://dx.doi.org/10.1016/j.future.2008.02.011
  27. [MONT-08a]J. Montagnat, Glatard, T., Campos, I., Castejon, F., Pennec, X., Giuliano, T., Voznesensky, V., and Vuerli, C., “Workflow-based data parallel applications on the EGEE production grid infrastructure”, Journal of Grid Computing, vol. 6, pp. 369–383, 2008.
    http://www.springerlink.com/content/n44056t50613p235/
  28. [MONT-07]J. Montagnat, Glatard, T., and Lingrand, D., “Texture-based Medical Image Indexing and Retrieval on Grids”, Medical Imaging Technology, vol. 25, 2007.
    http://rainbow.polytech.unice.fr/publis/montagnat-glatard-etal:2007.pdf
  29. [GERM-05]C. Germain, Breton, V., Clarysse, P., Gaudeau, Y., Glatard, T., Jeannot, E., Legre, Y., Loomis, C., Magnin, I. E., Montagnat, J., Moureau, J. M., Osorio, A., Pennec, X., and Texier, R., “Grid-enabling medical image analysis”, J Clin Monit Comput, vol. 19, pp. 339-349, 2005.

Conference Paper

  1. [CHAI-17]“Modeling Distributed Platforms from Application Traces for Realistic File Transfer Simulation”, in 17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid), 2017.
  2. [BOUJ-15]N. Boujelben and Glatard, T., “Importing neuGRID workflows in VIP”, in 7th International Workshop on Science Gateways, Budapest, Hungary, 2015, pp. 85-90.
  3. [GLAT-15]T. Glatard and Evans, A. C., “Classifications of computing sites to handle numerical variability”, in Workshop on Clusters, Clouds and Grids for Life Sciences (CCGrid-LIfe), in conjunction with 15th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid), Shenzen, China, 2015, pp. 863 - 870.
  4. [GLAT-14]T. Glatard, Rousseau, M., Rioux, P., Adalat, R., and Evans, A. C., “Controlling the deployment of virtual machines on clusters and clouds for scientific computing in CBRAIN”, in 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, Chicago, USA, 2014, pp. 384-393.
  5. [CIPI-14]S. Cipière, Ereteo, G., Gaignard, A., Boujelben, N., Gaspard, S., Breton, V., Cervenansky, F., Hill, R. C., Glatard, T., Manset, D., Montagnat, J., Revillard, J., and Maigne, L., “Global Initiative for Sentinel e-Health Network on Grid (GINSENG) Medical data integration and semantic developments for epidemiology”, in Workshop on Clusters, Clouds and Grids for Health, In conjunction with CCGrid 2014, 2014.
  6. [FERR-13a]R. Ferreira da Silva, Glatard, T., and Desprez, F., “Workflow fairness control on online and non-clairvoyant distributed computing platforms”, in Euro-Par, Aachen, Germany, 2013, pp. 102-113.PDF icon europar2013-fairness.pdf (402.37 KB)
  7. [FERR-13c]R. Ferreira da Silva, Juve, G., Deelman, E., Glatard, T., Desprez, F., Thain, D., Tovar, B., and Livny, M., “Toward Fine-Grained Online Task Characteristics Estimation in Scientific Workflows”, in 8th Workshop On Workflows in Support of Large-Scale Science (WORKS), Denver, United States, 2013, pp. 58-67.
    http://doi.acm.org/10.1145/2534248.2534254
  8. [FERR-13b]R. Ferreira da Silva, Glatard, T., and Desprez, F., “On-line, non-clairvoyant optimization of workflow activity granularity on grids”, in Euro-Par, Aachen, Germany, 2013, pp. 255-266.PDF icon europar2013.pdf (340.46 KB)
  9. [CAMA-13a]S. Camarasu-Pop, Glatard, T., and Benoit-Cattin, H., “Simulating Application Workflows and Services Deployed on the European Grid Infrastructure”, in 13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing (CCGrid), Delft, The Netherlands, 2013, p. 18--25.PDF icon simulation_ccgrid2013_revised.pdf (208.3 KB)
  10. [FENG-12]D. Feng, Germain-Renaud, C., and Glatard, T., “Distributed Monitoring with Collaborative Prediction”, in 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing , Ottawa, Canada, 2012, p. 376--383.
  11. [GIBA-12]B. Gibaud, Forestier, G., Benoit-Cattin, H., Cervenansky, F., Clarysse, P., Friboulet, D., Gaignard, A., Hugonnard, P., Lartizien, C., Liebgott, H., Montagnat, J., Tabary, J., and Glatard, T., “OntoVIP: an ontology for the annotation of object models used for medical image simulation”, in IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology (HISB), La Jolla, California, USA, 2012, pp. 110-119.
  12. [GLAT-12]T. Glatard, Marion, A., Benoit-Cattin, H., Camarasu-Pop, S., Clarysse, P., Ferreira da Silva, R., Forestier, G., Gibaud, B., Lartizien, C., Liebgott, H., Moulin, K., and Friboulet, D., “Multi-modality image simulation with the virtual imaging platform: Illustration on cardiac MRI and echography”, in IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, Spain, 2012, pp. 98-101.PDF icon isbi2012-vip.pdf (808.08 KB)
  13. [FERR-12]R. Ferreira da Silva, Glatard, T., and Desprez, F., “Self-healing of operational workflow incidents on distributed computing infrastructures”, in 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing - CCGrid 2012, Ottawa, Canada, 2012, pp. 318-325.PDF icon ccgrid2012.pdf (435.3 KB)
  14. [FERR-12a]R. Ferreira da Silva and Glatard, T., “A science-gateway workload archive to study pilot jobs, user activity, bag of tasks, task sub-steps, and workflow executions”, in CoreGRID/ERCIM Workshop on Grids, Clouds and P2P Computing - CGWS 2012, Rhodes Island, Greece, 2012, pp. 79-88.PDF icon 2012-cgws.pdf (1.09 MB)
    http://link.springer.com/chapter/10.1007%2F978-3-642-36949-0_10
  15. [MICH-12]F. Michel, Montagnat, J., and Glatard, T., “Technical support for Life Sciences communities on a production grid infrastructure”, in HealthGrid 2012, Amsterdam, The Netherlands, 2012, pp. 81-90.
    http://hal.archives-ouvertes.fr/hal-00677839/PDF
  16. [FORE-11]G. Forestier, Marion, A., Benoit-Cattin, H., Clarysse, P., Friboulet, D., Glatard, T., Hugonnard, P., Lartizien, C., Liebgott, H., Tabary, J., and Gibaud, B., “Sharing object models for multi-modality medical image simulation: a semantic approach”, in The 24th International Symposium on Computer-Based Medical Systems (CBMS 2011), Bristol, UK, 2011, pp. 1-6.PDF icon cbms2011.pdf (226.44 KB)
  17. [GUET-11b]P. Gueth, Camarasu-Pop, S., Glatard, T., Grevillot, L., and Sarrut, D., “PBS proton treatment plan simulation with the GATE-Lab”, in 50th International PTCOG meeting (Particle Therapy Co-Operative Group), Philadelphia, US, 2011.
    http://www.creatis.insa-lyon.fr/~dsarrut/articles/Gueth2011.pdf
  18. [MARI-11b]A. Marion, Forestier, G., Benoit-Cattin, H., Camarasu-Pop, S., Clarysse, P., Ferreira da Silva, R., Gibaud, B., Glatard, T., Hugonnard, P., Lartizien, C., Liebgott, H., Specovius, S., Tabary, J., Valette, S., and Friboulet, D., “Multi-modality medical image simulation of biological models with the Virtual Imaging Platform (VIP)”, in The 24th International Symposium on Computer-Based Medical Systems (CBMS 2011), Bristol, UK, 2011, pp. 1-6.PDF icon cbms2011-multimod.pdf (726.29 KB)
  19. [FERR-11]R. Ferreira da Silva, Camarasu-Pop, S., Grenier, B., Hamar, V., Manset, D., Montagnat, J., Revillard, J., Balderrama, J. R., Tsaregorodtsev, A., and Glatard, T., “Multi-infrastructure workflow execution for medical simulation in the Virtual Imaging Platform”, in HealthGrid 2011, Bristol, UK, 2011.PDF icon hg11-platform.pdf (856.36 KB)
  20. [FRED-11]S. B. Fredj, Glatard, T., Casta, C., and Clarysse, P., “An exploration framework for segmentation parameter spaces”, in IEEE International Conference on Image Processing , Brussels, Belgium, 2011, p. 2257--2260.PDF icon icip11.pdf (346.24 KB)
  21. [MONT-10]J. Montagnat, Glatard, T., Reimert, D., Maheshwari, K., Caron, E., and Desprez, F., “Workflow-based comparison of two Distributed Computing Infrastructures”, in 5th Workshop on Workflows in Support of Large-Scale Science (WORKS10), New-Orleans, LA, 2010.PDF icon works10-revision.pdf (345.92 KB)
  22. [TAN-10]W. - J. Tan, Ching, C. T. M., Camarasu-Pop, S., Calvat, P., and Glatard, T., “Two experiments with application-level quality of service on the EGEE grid”, in Proceeding of the 2nd workshop on Grids meets autonomic computing, New York, NY, USA, 2010, pp. 11–20.
    http://doi.acm.org/10.1145/1809029.1809031
  23. [LI-10]T. Li, Camarasu-Pop, S., Glatard, T., Grenier, T., and Benoit-Cattin, H., “Optimization of Mean-Shift scale parameters on the EGEE grid”, in Studies in health technology and informatics, Proceedings of Healthgrid 2010, 2010, vol. 159, pp. 203-214.PDF icon hg10.pdf (1.03 MB)
  24. [MONT-09]J. Montagnat, Isnard, B., Glatard, T., Maheshwari, K., and Blay-Fornarino, M., “A data-driven workflow language for grids based on array programming principles”, in Workshop on Workflows in Support of Large-Scale Science(WORKS'09), 2009.
    http://rainbow.polytech.unice.fr/publis/montagnat-isnard-etal:2009.pdf
  25. [GLAT-09a]T. Glatard, Zhou, X., Camarasu-Pop, S., Smirnova, O., and Muller, H., “A comparison between ARC and gLite for medical image processing on Grids”, in 2nd workshop on Medical imaging on GRID, HPC and GPU infrastructures: achievements and perspectives (MICCAI-Grid), London, UK, 2009.PDF icon MICCAI_ARC_gLite-final.pdf (102.37 KB)
  26. [MAHE-09]K. Maheshwari, Glatard, T., Schaerer, J., Delhay, B., Camarasu-Pop, S., Clarysse, P., and Montagnat, J., “Towards Production-level Cardiac Image Analysis with Grids”, in HealthGrid'09, Berlin, 2009.PDF icon healthgrid09.pdf (813.4 KB)
  27. [LING-09]D. Lingrand, Montagnat, J., and Glatard, T., “Modeling user submission strategies on production grids”, in International Symposium on High Performance Distributed Computing (HPDC'09), Munchen, Germany, 2009.PDF icon lingrand-montagnat-etal_2009.pdf (374.77 KB)
  28. [OLAB-09]S. Olabarriaga, Glatard, T., Hoheisel, A., Nederveen, A., and Krefting, D., “Crossing HealthGrid Borders: Early Results in Medical Imaging”, in HealthGrid'09, Berlin, 2009.
  29. [GLAT-09]T. Glatard and Camarasu-Pop, S., “Modelling pilot-job applications on production grids”, in 7th international workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms (Heteropar 09), Delft, The Netherlands, 2009.PDF icon heteropar09-glatard-camarasu-final.pdf (1.53 MB)
  30. [GLAT-08d]T. Glatard and Olabarriaga, S., “From gridified scripts to workflows: the FSL Feat case”, in MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, 2008, pp. 33–42.
    http://staff.science.uva.nl/ glatard/docs/miccai_grid08_new.pdf
  31. [GLAT-08e]T. Glatard, Montagnat, J., and Pennec, X., “A framework for evaluating the impact of compression on registration algorithms without gold standard”, in International Conference on Image Processing (ICIP'08), San Diego, California, USA, 2008, pp. 2912-2915.
    http://staff.science.uva.nl/ glatard/docs/icip08.pdf
  32. [LING-08]D. Lingrand, Montagnat, J., and Glatard, T., “Estimating the execution context for refining submission strategies on production grids”, in Assessing Models of Networks and Distributed Computing Platforms (ASSESS / ModernBio) (CCGrid'08), Lyon, France, 2008, pp. 753–758.
    http://rainbow.polytech.unice.fr/publis/lingrand-montagnat-etal:2008.pdf
  33. [GLAT-08c]T. Glatard and Montagnat, J., “Implementation of Turing machines with the Scufl data-flow language”, in 3rd International Workshop on Workflow Systems in e-Science (WSES'08), Lyon, France, 2008.
    http://rainbow.polytech.unice.fr/publis/glatard-montagnat:2008.pdf
  34. [SOLE-08e]R. S. Soleman, Glatard, T., Veltman, D. J., Nederveen, A., and Olabarriaga, S., “Large scale fMRI parameter study on a production grid”, in MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, 2008, pp. 65–74.
    http://staff.science.uva.nl/ glatard/docs/miccai08_grid_exp.pdf
  35. [GLAT-08b]T. Glatard, Montagnat, J., and Pennec, X., “A probabilistic model to analyse workflow performance on production grids”, in IEEE International Symposium on Cluster Computing and the Grid (CCGrid'08), Lyon, France, 2008, pp. 510–517.
    http://rainbow.polytech.unice.fr/publis/glatard-montagnat-etal:2008b.pdf
  36. [OLAB-08]S. Olabarriaga, Glatard, T., Boulebiar, K., and de Boer, P. T., “From 'low-hanging' to 'user-ready': initial steps into a healthgrid”, in HealthGrid'08, Chicago, USA, 2008, pp. 70-79.
    https://conferences.healthgrid.org/getFile.py/access?contribId=53&sessionId=28&resId=0&materialId=paper&confId=0
  37. [GLAT-08a]T. Glatard, Boulebiar, K., and Olabarriaga, S., “Workflow integration in VL-e medical”, in 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS'08), Jyväskylä, Finland, 2008, pp. 144-146.
    http://staff.science.uva.nl/ glatard/pub/glatardBoulebiarOlabarriaga.pdf
  38. [GLAT-08f]T. Glatard and Olabarriaga, S., “User friendly management of workflow results: from provenance information to grid logical file names”, in 4th IEEE International Conference on e-Science (eScience'08), Indianapolis, USA, 2008.
    http://staff.science.uva.nl/ glatard/docs/glatardOlabarriaga-eScience08.pdf
  39. [GLAT-07a]T. Glatard, Lingrand, D., Montagnat, J., and Riveill, M., “Impact of the execution context on Grid job performances”, in International Workshop on Context-Awareness and Mobility in Grid Computing (WCAMG'07) (CCGrid'07), Rio de Janeiro, Brazil, 2007, pp. 713–718.
    http://rainbow.polytech.unice.fr/publis/glatard-lingrand-etal:2007.pdf
  40. [GLAT-07b]T. Glatard, Montagnat, J., and Pennec, X., “Optimizing jobs timeouts on clusters and production grids”, in International Symposium on Cluster Computing and the Grid (CCGrid'07), Rio de Janeiro, Brazil, 2007, pp. 100-107.
    http://rainbow.polytech.unice.fr/publis/glatard-montagnat-etal:2007a.pdf
  41. [NEMO-07]C. Nemo, Glatard, T., Blay-Fornarino, M., and Montagnat, J., “Merging overlapping orchestrations: an application to the Bronze Standard medical application”, in International Conference on Services Computing (SCC 2007), Salt Lake City, Utah, USA, 2007, pp. 364–371.
    http://www.i3s.unice.fr/ johan/publis/SCC07.pdf
  42. [GLAT-06c]T. Glatard, Emsellem, D., and Montagnat, J., “Generic web service wrapper for efficient embedding of legacy codes in service-based workflows”, in Grid-Enabling Legacy Applications and Supporting End Users Workshop (GELA'06), Paris, France, 2006, pp. 44–53.
    http://www.i3s.unice.fr/ johan/publis/GELA06.pdf
  43. [GLAT-06f]T. Glatard, Montagnat, J., and Pennec, X., “Medical image registration algorithms assessment: Bronze Standard application enactment on grids using the MOTEUR workflow engine”, in HealthGrid'06, Valencia, Spain, 2006, pp. 93–103.
    http://www.i3s.unice.fr/ johan/publis/HealthGrid06b.pdf
  44. [MONT-06]J. Montagnat, Glatard, T., and Lingrand, D., “Data composition patterns in service-based workflows”, in Workshop on Workflows in Support of Large-Scale Science (WORKS'06), Paris, France, 2006.
    http://rainbow.polytech.unice.fr/publis/montagnat-glatard-etal:2006.pdf
  45. [GLAT-06b]T. Glatard, Montagnat, J., and Pennec, X., “An experimental comparison of Grid5000 clusters and the EGEE grid”, in Workshop on Experimental Grid testbeds for the assessment of large-scale distributed applications and tools (EXPGRID'06), Paris, France, 2006.
    http://www.i3s.unice.fr/ johan/publis/EXPGRID06.pdf
  46. [GLAT-06a]T. Glatard, Pennec, X., and Montagnat, J., “Performance evaluation of grid-enabled registration algorithms using bronze-standards”, in Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark, 2006, pp. 152–160.
    http://www.i3s.unice.fr/ johan/publis/MICCAI06.pdf
  47. [GLAT-06e]T. Glatard, Montagnat, J., and Pennec, X., “Probabilistic and dynamic optimization of job partitioning on a grid infrastructure”, in 14th euromicro conference on Parallel, Distributed and network-based Processing (PDP06), Montbéliard-Sochaux, France, 2006, pp. 231–238.
    http://www.i3s.unice.fr/ johan/publis/PDP06.pdf
  48. [GLAT-06d]T. Glatard, Montagnat, J., and Pennec, X., “Efficient services composition for grid-enabled data-intensive applications”, in IEEE International Symposium on High Performance Distributed Computing (HPDC'06), Paris, France, 2006, pp. 333–334.
    http://www.i3s.unice.fr/ johan/publis/HPDC06.pdf
  49. [GLAT-05a]T. Glatard, Montagnat, J., and Pennec, X., “Grid-enabled workflows for data intensive medical applications”, in 18th IEEE International Symposium on Computer-Based Medical Systems (CBMS), Dublin, Ireland, 2005, pp. 537-542.
    http://www.i3s.unice.fr/ johan/publis/CBMS05.pdf
  50. [GERM-05a]C. Germain, Breton, V., Clarysse, P., Gaudeau, Y., Glatard, T., Jeannot, E., Legré, Y., Loomis, C., Montagnat, J., Moureaux, J. M., Osorio, A., and Texier, R., “Grid-enabling medical image analysis”, in Biogrid'05, proceedings of the IEEE/ACM International Symposium on Cluster Computing and the Grid, Cardiff, UK, 2005.
    http://www.cse.uconn.edu/ huang/BioGrid-05/
  51. [GLAT-04]T. Glatard, Montagnat, J., and Magnin, I. E., “Texture based medical image indexing and retrieval: application to cardiac imaging”, in Proceedings of ACM Multimedia 2004, workshop on Multimedia Information Retrieval (MIR), New York, NY, USA, 2004, pp. 135–142.
    http://www.i3s.unice.fr/ johan/publis/MIR04.pdf

Conference Proceedings

  1. [GESI-12]S. Gesing, Glatard, T., Krüger, J., Olabarriaga, S. D., Solomonides, T., Silverstein, C., Montagnat, J., Gaignard, A., and Krefting, D., “HealthGrid Applications and Technologies meet Science Gateways for Life Sciences, proceedings of HealthGrid 2012”, HealthGrid, vol. 175. 2012.
  2. [SOLO-10]T. Solomonides, Blanquer, I., Breton, V., Glatard, T., and Legré, Y., “Healthgrid Applications and Core Technologies, proceedings of HealthGrid 2010”, HealthGrid, vol. 159. 2010.

Book Chapter

  1. [FERR-15]R. Silva, Glatard, T., and Desprez, F., “Self-management of operational issues for grid computing: the case of the virtual imaging platform”, in Emerging research in cloud distributed computing systems, S. Bagchi IGI Global, 2015.
  2. [FRAN-14]A. Frangi, Friboulet, D., Ayache, N., Delingette, H., Glatard, T., Hoogendoorn, C., Humbert, L., Lekadir, K., Larrabide, I., Martelli, Y., Peyrin, F., Planes, X., Sermesant, M., Villa-Uriol, M., Whitmarsh, T., and Atkinson, D., “Image Based Modelling”, in Computational Biomedicine, P. Coveney, Díaz-Zuccarini, V., Hunter, P., and Viceconti, M. Oxford University Press, 2014, pp. 59-83.
  3. [CAMA-11]S. Camarasu-Pop, Glatard, T., Benoit-Cattin, H., and Sarrut, D., “Enabling Grids for GATE Monte-Carlo Radiation Therapy Simulations with the GATE-Lab”, in Applications of Monte Carlo Method in Science and Engineering, InTech 2011.
    http://www.creatis.insa-lyon.fr/~dsarrut/articles/Camarasu-Pop2011.pdf
  4. [GERM-09]C. Germain-Renaud, Breton, V., Clarysse, P., Delhay, B., Gaudeau, Y., Glatard, T., Jeannot, E., Legré, Y., Montagnat, J., Moureaux, J. M., Osorio, A., Pennec, X., Schaerer, J., and Texier, R., “Grid Analysis of Radiological Data”, in Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, M. Cannataro IGI, 2009.
  5. [GLAT-07]T. Glatard, Sipos, G., Montagnat, J., Farkas, Z., and Kacsuk, P., “Workflow Level Parametric Study Support by MOTEUR and the P-GRADE Portal”, in Workflows for e-Science, I. J. Taylor, Deelman, E., Gannon, D., and Shields, M. Springer, 2007, pp. 279–299.
    http://www.i3s.unice.fr/ johan/publis/workflow-chap18.pdf

Invited Conference

  1. [CLAR-12a]P. Clarysse, Glatard, T., and Cervenansky, F., “Simulation d’images pour l’aide à l’évaluation en analyse d’images cardiaques - La plateforme d’imagerie virtuelle VIP”, Consortium du projet ANR VIP. Journée GDR STIC-Santé sur l’évaluation de méthodes de segmentation en Imagerie Médicale, Paris, 2012.

Thesis

  1. [GLAT-07c]T. Glatard, “Description, deployment and optimization of medical image analysis workflows on production grids”, Université de Nice Sophia-Antipolis, Sophia-Antipolis, 2007.
    http://rainbow.polytech.unice.fr/publis/glatard:2007.pdf

Miscellaneous

  1. [45714]T. Glatard, Ferreira da Silva, R., Boujelben, N., Adalat, R., Beck, N., Rioux, P., Rousseau, M., Deelman, E., and Evans, A. C., “Boutiques: an application-sharing system based on Linux containers”. Neuroinformatics 2015, Cairns, Australia., 2015.
  2. [45718]T. Glatard, Adalat, R., Beck, N., Rioux, P., Rousseau, M., and Evans, A. C., “High-Throughput neuroimaging on the Amazon cloud with CBRAIN”. Meeting of the Organization for Human Brain Mapping, Hawaii, USA, 2015.
    https://ww4.aievolution.com/hbm1501/index.cfm?do=abs.viewAbs&abs=1859
  3. [45715]T. Glatard, Cointepas, Y., Commowick, O., Kain, M., Laurent, B., Leray, F., and Barillot, C., “CARMIN: a common web API for remote pipeline execution”. Neuroinformatics 2015, Cairns, Australia, 2015.
  4. [45717]T. Glatard, Lewis, L. B., Ferreira da Silva, R., Rousseau, M., Lepage, C., Rioux, P., Khalili-Mahani, N., Deelman, E., and Evans, A. C., “Extending provenance information in CBRAIN to address reproducibility issues across computing platforms”. Neuroinformatics 2014, Leiden, Netherlands, 2014.
  5. [45716]T. Glatard, Rousseau, M., Camarasu-Pop, S., Rioux, P., Sherif, T., Beck, N., Adalat, R., and Evans, A. C., “Interoperability between the CBRAIN and VIP web platforms for neuroimage analysis”. Neuroinformatics 2014, Leiden, Netherlands, 2014.
  6. [WANG-12]L. Wang, Camarasu-Pop, S., Glatard, T., Zhu, Y. M., and Magnin, I. E., “Diffusion MRI Simulation with the Virtual Imaging Platform”, Journées scientifiques mésocentres et France Grilles 2012. Paris, France, 2012.
    http://hal.archives-ouvertes.fr/docs/00/76/60/81/PDF/Grid_Paper_06_09_2012.pdf
  7. [GIBA-12]B. Gibaud, Forestier, G., Benoit-Cattin, H., Cervenansky, F., Clarysse, P., Friboulet, D., Gaignard, A., Hugonnard, P., Lartizien, C., Liebgott, H., Montagnat, J., Tabary, J., and Glatard, T., “Design of an ontology for the annotation of object models used for medical image simulation”. Lyon, 2012.
  8. [FERR-12b]R. Ferreira da Silva, Glatard, T., and Desprez, F., “A science-gateway workload archive: application to the self-healing of workflow incidents”, Journées scientifiques mésocentres et France Grilles 2012. Paris, France, 2012.
    http://hal.archives-ouvertes.fr/docs/00/76/60/70/PDF/mesogrilles_2012_camera_ready.pdf
  9. [ARRA-12]L. Arrabito, Bouvet, D., Camarasu-Pop, S., Cardenas, Y., Clémentin, N., Cordier, H., Gallina, S., Garnier, J., Gay, P., Glatard, T., Hamar, V., Lavalley, C., Mathieu, G., Sapunov, M., Ferreira da Silva, R., and Tsaregorodtsev, A., “Instance nationale et multi-communauté de DIRAC pour France Grilles”, Journées scientifiques mésocentres et France Grilles 2012. Paris, France, 2012.
    http://hal.archives-ouvertes.fr/docs/00/76/60/84/PDF/DIRAC_mesogrilles_FINAL_v1_4_2.pdf
  10. [CAMA-09]S. Camarasu-Pop, Benoit-Cattin, H., Moscicki, J., Sarrut, D., and Glatard, T., “Results and evaluation of ThIS on grid”. Catania, Italie, 2009.
  11. [GLAT-09c]T. Glatard, Camarasu-Pop, S., Benoit-Cattin, H., Clarysse, P., Montagnat, J., Moscicki, J., Olabarriaga, S., and Sarrut, D., “Integrating pilot-jobs, workflows and virtual resource browser to foster medical image analysis on EGEE”. Catania, Italie, 2009.

Pages