wxContourMainFrame.h

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#ifndef __wxContourMainFrame_h_INCLUDED_H__
#define __wxContourMainFrame_h_INCLUDED_H__


// -----------------------------------------------------------------------------------------------------------
// WX headers inclusion.
// For compilers that support precompilation, includes <wx/wx.h>.
// -----------------------------------------------------------------------------------------------------------

#include <wx/wxprec.h>
#ifdef __BORLANDC__
#pragma hdrstop
#endif
#ifndef WX_PRECOMP
#include <wx/wx.h>
#endif


//------------------------------------------------------------------------------------------------------------
// Includes
//------------------------------------------------------------------------------------------------------------
#include "wx/aui/aui.h"

#include "interfMainPanel.h"
#include "KernelManagerContour.h"

//#include "wxVtkBaseView_SceneManager.h"
#include "wxInstantChooserPanel.h"
#include "wxContourViewPanel.h"

//#include "ContourWorkspace.h"
#include "ContourExtractData.h"
#include "PerformingOperation.h"

#include "manualLineControler.h"
#include "manualContourModelLine.h"
#include "manualViewLine.h"

#include "ThresholdImageView.h"
#include "ThresholdImageViewPanel.h"
#include "ColorLayerImageView.h"
#include "ColorLayerImageViewPanel.h"


//ITK
#include "itkImage.h"
#include "itkGeodesicActiveContourLevelSetImageFilter.h"

#include "itkCurvatureAnisotropicDiffusionImageFilter.h"
#include "itkGradientMagnitudeRecursiveGaussianImageFilter.h"
#include "itkSigmoidImageFilter.h"
#include "itkFastMarchingImageFilter.h"
#include "itkRescaleIntensityImageFilter.h"
#include "itkBinaryThresholdImageFilter.h"
#include "itkZeroCrossingImageFilter.h"
#include "itkCastImageFilter.h"

//EED10JUIN2011  #include "itkImageFileWriter.h"

#include "itkImageToVTKImageFilter.h"
#include "itkVTKImageToImageFilter.h"

//VTK
#include <vtkImageSeedConnectivity.h>
#include <vtkImageMarchingCubes.h>
#include "vtkContourFilter.h"
#include "vtkMarchingContourFilter.h"
#include "vtkPolyDataConnectivityFilter.h"
#include "vtkCleanPolyData.h"
#include "vtkImageReslice.h"
#include "vtkMetaImageWriter.h"
#include "vtkImageData.h"
#include "vtkTransform.h"

#include "vtkCamera.h"
#include "vtkImageActor.h"
#include <vtkImageMapToColors.h>
#include <vtkLookupTable.h>
#include <vtkCommand.h>

//#include "vtkMetaImageReader.h"

//------------------------------------------------------------------------------------------------------------
// Events declaration
//------------------------------------------------------------------------------------------------------------

//BEGIN_DECLARE_EVENT_TYPES()
//END_DECLARE_EVENT_TYPES()

//------------------------------------------------------------------------------------------------------------
// Class definition
//------------------------------------------------------------------------------------------------------------
class interfMainPanel;
class wxContourMainFrame : public wxPanel {

        public:

        //------------------------------------------------------------------------------------------------------------
        // Constructors & Destructors
        //------------------------------------------------------------------------------------------------------------


        wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
        wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER,std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");

        ~wxContourMainFrame();

        //------------------------------------------------------------------------------------------------------------
        // Creational and initialization methods
        //------------------------------------------------------------------------------------------------------------

        void setVectImages(std::vector<vtkImageData*> imgs);

        bool configurePanels( );

        bool addNewPanel(wxPanel* panel);

        wxAuiNotebook * createNotebook();

        void createInstantChooserPanel(wxAuiNotebook * parent);

        void createViewPanel(wxAuiNotebook * parent);

        void createInstantChooserPanel(wxWindow * parent);

        void createViewPanel(wxWindow * parent);

        void setInstantChooserPanel(  wxInstantChooserPanel * theInstantChooserPanel );

        void getMaskValue(vtkImageData ** mask,vtkImageData ** value,int typeContourGroup, int selection, int minZ, int maxZ);

        void SaveImageResult(std::string directory,std::string namefile, vtkImageData* mask,vtkImageData* value);

        void ShowToolsPanel(bool show);






        //------------------------------------------------------------------------------------------------------------
        //  Attributes getters and setters
        //------------------------------------------------------------------------------------------------------------
        static wxContourMainFrame* getInstance(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER, std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");
        static wxContourMainFrame* getInstance();
        static void resetInstance();

        //------------------------------------------------------------------------------------------------------------
        //  Other functional methods
        //------------------------------------------------------------------------------------------------------------

        /*
        ** This method returns the vector of images selected by the user
        **      return value std::vector<vtkImageData*>
        */
        std::vector<vtkImageData*> getVectImages();

        void onCreateContourSpline( );
        void onCreateContourRectangle( );
        void onCreateContourCircle( );
        void onCreateContourLine( );
        void onCreateContourPoints( );
        void onCreateContourPolygon( );
        void onCreateContourBullEye(wxPanel* pan);
        void onDeleteContour();
        void deleteContours( std::vector<std::string>  keyNamesVector );
        void deleteContour( std::string theKeyName );
        void onDeleteContoursActSlice();
        void onDeleteAllContours();
        void deleteAllContours();
        void setConceptValue( std::string name, int value );
        ConceptDataWrap* getLastConceptData();
        bool getIfConceptCheckedAt( std::string name, int pos );

        void changeInstant();

        int getNamesWrappingSize();

        std::string getNameWrapping(int i);

        void updateInstantOutlines();
        void updateInstantImageData();
        void updateInstantAxes();

        void onChangeDeep(int val);

        void onCopy();
        void onPaste();
        void onUndo();
        void onRedo();
        void createCopyContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
        void createMirrorContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
        void onLoad();
        void onSave();
        void onImport();
        void onTest();
        void openContours( FILE *pFile, FILE *pFileData, bool staticContour );

        void RefreshInterface();

        vtkImageData* getImageData();

        void onSegmentationOneSlice(int isovalue,int sampling,int method);
        void onSegmentationOneSliceITK(wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
        void SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method );
        void SegmentationOneSliceITK(int x, int y, int z, wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
        void Mirror( int x, int y, int z, int isovalue, int sampling, int method );
        int  GetImageDataSizeZ();
        void GetImageDataRange(double *range);
        void onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method);

        //AD
        void referenceLine();
        void refLineHide();
        void refLineShow();
        void refLineChangeWidth(int width);

        //AD
        void onMirror();


//====================================================================================================

        void showAxis(bool show);
        void onRigidPressed();
        void onWidthOfContour(double width);
        int getColorWindow();
        int getWindowLevel();
        void onBrigthnessColorWindowLevel(int colorwindow,int windowlevel);
        void onInterpolation(bool interpolate);
        void onChangeInstant(std::string name,int actual);
        void resetAppend();
        void onSpreadAdd();
        void onSpreadAddAll();
        void onSpreadGo(int type);
        void getInstantVector(std::vector<int>& tempVector);
        std::vector<std::string> getOutlinesName(int slide);

        //
        //
        // @param typeContourGroup - int The operation id (AND,OR,XOR,ALL=3)
        //
        void onInformationContourLabels(int typeContourGroup,int selection,int minimumZ,int maximumZ,int grayRangeMin, int grayRangeMax);
        void onSaveResults(std::string directory,std::string namefile, std::string filename,
                int typeContourGroup, int selection, int minZ, int maxZ, bool XYZValues, bool contourImage, bool statistics);
        void SaveValuesXYZ(std::string directory,std::string namefile, int typeContourGroup);
        void onChangeInstantInstantPanel(std::string name,int value, int minshow, int maxshow);
        void onSnakePressed();
        void saveFileWithContoursAutomatique();
        void ShowResultImages(int typeContourGroup, int selection, int minZ, int maxZ );
        wxPanel *getMaskImageViewPanel(wxWindow *parent);
        void SetContourGroup(int contourGroup);
        wxPanel *getThresholdImageViewPanel(wxWindow *parent);
        wxPanel *getColorLayerImageViewPanel(wxWindow *parent);


//CMRU 17-08-09-----------------------------------------------------------------------------------------------

        void onPrintLabel (wxString label, manualBaseModel* manualModel);

        void onInsertCalculation(manualBaseModel* manualModel);

        double onePixelSize(double value);

        int getType();

        double getContourSizeInPixels();

        manualBaseModel* getContour();

        std::string GetFileLocation();

        void SetFileLocation(std::string newFileLocation);
//------------------------------------------------------------------------------------------------------------

        void SetScalarRange(int grayRangeMin, int grayRangeMax);

//------------------------------------------------------------------------------------------------------------

private:
        //------------------------------------------------------------------------------------------------------------
        //  Private methods
        //------------------------------------------------------------------------------------------------------------


        //------------------------------------------------------------------------------------------------------------
        // Attributtes
        //------------------------------------------------------------------------------------------------------------

        int _contourGroup;
        static wxContourMainFrame   *instance;
        KernelManagerContour        *kernelManager;
        interfMainPanel             *_pannew;
        PerformingOperation         *_performingOperation;
        std::string                 _datadir;
        wxContourViewPanel          *_theViewPanel;
        wxInstantChooserPanel       *_instantPanel;

        //AD: 03-09: This attributes represents the reference line that is going to be used for the mirroring
        manualLineControler         *_refLineControl;
        manualContourModelLine      *_refLineModel;
        manualViewLine              *_refLineView;

        wxAuiManager                m_mgr;
        wxAuiNotebook               *notebook;
    long                        m_notebook_style;
    long                        m_notebook_theme;
    int                         _numberOfVariablesStatistics;

        // Contour Image Mask
        ThresholdImageView                      *_viewMaskImage;
        ThresholdImageViewPanel         *_viewMaskImagePanel;

        // Threshold Image
        ThresholdImageView                      *_viewThresholdImage;
        ThresholdImageViewPanel         *_viewThresholdImagePanel;

        // Color Layer Image
        ColorLayerImageView                     *_viewColorLayerImage;
        ColorLayerImageViewPanel        *_viewColorLayerImagePanel;
        std::vector<vtkImageData*>  _images;
        bool                        _actorPresent;

    // temporary variables readding .roi file
    int             _tmpReadFileImageDim[3];
        double          _tmpReadFileImageSpac[3];
    int             _tmpReadFileTypeOfTransformation;
    void readDimSpc(FILE *pFile, bool interactiveOption);


        /*DECLARE_CLASS(wxContourMainFrame)
        // any class wishing to process wxWindows events must use this macro
        DECLARE_EVENT_TABLE()*/
        bool                        _creatingContoursActive;
        void createContour( int typeContour );
        //manualContourModel * factoryManualContourModel(int typeContour);
        manualBaseModel * factoryManualContourModel(wxPanel* panel);
        ContourExtractData              *_contourextractdata;

        void saveState();
        void loadState(std::string filename);

//      void loadContours( FILE *pFile, bool staticContour );

        void saveFileWithContours( std::string filename );
        void onLoadContours(std::string fileNameContourROI, bool interactiveInterface);

        int                         inredo;
        int                         inundo;
        std::string                     stundoredo;
        static char                 COPY;

//CMRU 17-08-09-----------------------------------------------------------------------------------------------
        wxWindow                    *infoWin2;
        wxPanel                     *calibrationPanel;
        wxPanel                     *calibrationPanelError;
        double                      _onePixelSize;
        std::string                 _imageLocation;
        std::string                 _fileLocation;
//------------------------------------------------------------------------------------------------------------

};

#endif