[Dcmlib] Error Compile GDCM
Paulo Henrique Junqueira Amorim
paulojamorim at gmail.com
Wed Jan 30 22:08:34 CET 2008
Hi,
Sorry, reporting error
I am generate wrapper of the ITK and using itkGDCM presented the same
problem, Python 2.5 is reseted.
Thanks,
Paulo Amorim
2008/1/29, Mathieu Malaterre <mathieu.malaterre at gmail.com>:
>
> Hi Paulo,
>
> congrats on getting gdcm to compile. As you have discovered very few
> dev of GDCM are actually using GDCM on Win32 system :(
> Anyway I do not understand what could be the issue. Could you please
> send me a copy of the file you were trying to read ?
>
> Thanks
> -Mathieu
>
>
> On Jan 29, 2008 1:12 AM, Paulo Henrique Junqueira Amorim
> <paulojamorim at gmail.com> wrote:
> > Hi,
> >
> > Congratulations Mathieu,
> >
> > I am imported gdcmPython.vtk.vtkGdcmReader, but apress error presents .
> >
> > >>> import gdcmPython.vtk.vtkGdcmReader
> > >>> read = gdcmPython.vtk.vtkGdcmReader()
> > >>> read.SetName("c:\\dicom.dcm")
> > >>> read.update()
> >
> > Close Python Idle execute code.
> >
> > Attached picture with error and Class compiled to you test if necessary.
> >
> >
> > Thanks,
> > Paulo Henrique Junqueira Amorim
> >
> >
> >
> >
> > 2008/1/28, Mathieu Malaterre <mathieu.malaterre at gmail.com>:
> > > Hi Paulo,
> > >
> > > Could you try the following:
> > >
> > > copy the file: vtkgdcmPython.dll
> > > and rename it into vtkgdcmPython.pyd
> > >
> > > then try to load the lib again
> > >
> > > -Mathieu
> > >
> > > On Jan 28, 2008 6:05 PM, Paulo Henrique Junqueira Amorim
> > > <paulojamorim at gmail.com> wrote:
> > > > Hi,
> > > >
> > > > My
> > > >
> > > > Path = %PythonPath%
> > > >
> > > > PYTHONPATH =
> > > >
> >
> C:\Python25;C:\Python25\Lib\site-packages;C:\Python25\Lib\site-packages\vtk;C:\Python25\Lib\site-packages\gdcmPython;
> > > >
> > > > Within gdcmPython have
> > > >
> > > > Bmp2Dcm.lib
> > > > core.py
> > > > gdcm.dll
> > > > gdcm.lib
> > > > gdcm.py
> > > > gdcmjpeg12.dll
> > > > gdcmjpeg12.lib
> > > > gdcmjpeg16.dll
> > > > gdcmjpeg16.lib
> > > > gdcmjpeg8.dll
> > > > gdcmjpeg8.lib
> > > > gdcmopenjpeg.dll
> > > > gdcmopenjpeg.lib
> > > > gdcmVersion.py
> > > > gdcmVersion.pyc
> > > > vtk.py
> > > > vtk.pyc
> > > > vtkgdcm.dll
> > > > vtkgdcm.lib
> > > > vtkgdcmdemo.lib
> > > > vtkgdcmPython.dll
> > > > vtkgdcmPython.lib
> > > > vtkgdcmSerieViewer.lib
> > > > vtkgdcmSerieViewer2.lib
> > > > vtkgdcmViewer.lib
> > > > vtkgdcmViewer2.lib
> > > > vtkWriteDicom.lib
> > > > vtkWriteDicomExtended.lib
> > > > _gdcm.dll
> > > > _gdcm.lib
> > > > __init__.py
> > > > __init__.pyc
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > Thanks,
> > > > Paulo
> > > >
> > > >
> > > > 2008/1/28, Mathieu Malaterre <mathieu.malaterre at gmail.com>:
> > > > > You need to tell python where to look for loadable modules. In
> this
> > > > > case you should set something like this:
> > > > >
> > > > > PYTHONPATH=c:/dir/where/vtkgdcmPython/can/be/found
> > > > >
> > > > > HTH
> > > > > -Mathieu
> > > > >
> > > > > On Jan 28, 2008 5:35 PM, Paulo Henrique Junqueira Amorim
> > > > > <paulojamorim at gmail.com> wrote:
> > > > > > Hi,
> > > > > >
> > > > > > I am posting the list also,
> > > > > >
> > > > > > Thanks for tip,
> > > > > >
> > > > > > >>import gdcmPython
> > > > > > is ok,
> > > > > >
> > > > > > But Presents error.
> > > > > >
> > > > > > >>> import gdcmPython.vtk
> > > > > >
> > > > > > Traceback (most recent call last):
> > > > > > File "<stdin>", line 1, in <module>
> > > > > > File "C:\gdc\gdcmPython\demo\..\..\gdcmPython\vtk.py", line 6,
> in
> > > > > > <module>
> > > > > > from vtkgdcmPython import *
> > > > > > ImportError: No module named vtkgdcmPython
> > > > > > >>>
> > > > > >
> > > > > > Because I need to use vtkGdcmReader
> > > > > >
> > > > > >
> > > > > > Regards,
> > > > > > Paulo Amorim
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > > Hi Paulo,
> > > > > > >
> > > > > > > Please reply to the mailing list instead of private email,
> as
> > other
> > > > > > > might be able to help you too, thanks.
> > > > > > >
> > > > > > > For all 'pure' gdcm executable, you do not need to change
> > anything,
> > > > > > > since on windows the $PWD will be the first path used to look
> for
> > > > > > > shared libs. But if you are using 'hybrid' gdcm+VTK library,
> then
> > you
> > > > > > > either need to set your PATH to include the shared lib for
> VTK, or
> > > > > > > simply copy all the VTK dll into your gdcm bin directory
> (where
> > all
> > > > > > > gdcm .dll are to be found).
> > > > > > >
> > > > > > > HTH
> > > > > > > -Mathieu
> > > > > > >
> > > > > > >
> > > > > > > On Jan 28, 2008 2:08 PM, Paulo Henrique Junqueira Amorim
> > > > > > > <paulojamorim at gmail.com> wrote:
> > > > > > > > Congratulations Mathieu,
> > > > > > > >
> > > > > > > > I am update my cvs and compile:
> > > > > > > >
> > > > > > > > ========== Rebuild All: 18 succeeded, 0 failed, 1 skipped
> > ==========
> > > > > > > >
> > > > > > > > How do I use?
> > > > > > > >
> > > > > > > > Set in the path?
> > > > > > > >
> > > > > > > > Generate files:
> > > > > > > >
> > > > > > > > 28/01/2008 11:06 22.528 Bmp2Dcm.exe
> > > > > > > > 28/01/2008 11:06 4.924 Bmp2Dcm.exp
> > > > > > > > 28/01/2008 11:06 183.296 bmp2dcm.idb
> > > > > > > > 28/01/2008 11:06 8.928 Bmp2Dcm.lib
> > > > > > > > 28/01/2008 11:05 675.840 gdcm.dll
> > > > > > > > 28/01/2008 11:05 237.333 gdcm.exp
> > > > > > > > 28/01/2008 11:05 510.976 gdcm.idb
> > > > > > > > 28/01/2008 11:05 384.830 gdcm.lib
> > > > > > > > 28/01/2008 11:05 135.168 gdcmjpeg12.dll
> > > > > > > > 28/01/2008 11:05 20.623 gdcmjpeg12.exp
> > > > > > > > 28/01/2008 11:05 166.912 gdcmjpeg12.idb
> > > > > > > > 28/01/2008 11:05 35.368 gdcmjpeg12.lib
> > > > > > > > 28/01/2008 11:05 135.168 gdcmjpeg16.dll
> > > > > > > > 28/01/2008 11:05 20.623 gdcmjpeg16.exp
> > > > > > > > 28/01/2008 11:05 166.912 gdcmjpeg16.idb
> > > > > > > > 28/01/2008 11:05 35.368 gdcmjpeg16.lib
> > > > > > > > 28/01/2008 11:05 135.168 gdcmjpeg8.dll
> > > > > > > > 28/01/2008 11:05 20.268 gdcmjpeg8.exp
> > > > > > > > 28/01/2008 11:05 166.912 gdcmjpeg8.idb
> > > > > > > > 28/01/2008 11:05 34.648 gdcmjpeg8.lib
> > > > > > > > 28/01/2008 11:05 90.112 gdcmopenjpeg.dll
> > > > > > > > 28/01/2008 11:05 2.941 gdcmopenjpeg.exp
> > > > > > > > 28/01/2008 11:05 297.984 gdcmopenjpeg.idb
> > > > > > > > 28/01/2008 11:05 5.840 gdcmopenjpeg.lib
> > > > > > > > 28/01/2008 11:06 147.456 vtkgdcm.dll
> > > > > > > > 28/01/2008 11:06 37.104 vtkgdcm.exp
> > > > > > > > 28/01/2008 11:06 338.944 vtkgdcm.idb
> > > > > > > > 28/01/2008 11:06 61.916 vtkgdcm.lib
> > > > > > > > 28/01/2008 11:06 16.896 vtkgdcmdemo.exe
> > > > > > > > 28/01/2008 11:06 5.794 vtkgdcmdemo.exp
> > > > > > > > 28/01/2008 11:06 216.064 vtkgdcmdemo.idb
> > > > > > > > 28/01/2008 11:06 10.496 vtkgdcmdemo.lib
> > > > > > > > 28/01/2008 11:06 22.528 vtkgdcmPython.dll
> > > > > > > > 28/01/2008 11:06 592 vtkgdcmPython.exp
> > > > > > > > 28/01/2008 11:06 412.672 vtkgdcmpython.idb
> > > > > > > > 28/01/2008 11:06 1.898 vtkgdcmPython.lib
> > > > > > > > 28/01/2008 11:06 27.136 vtkgdcmSerieViewer.exe
> > > > > > > > 28/01/2008 11:06 5.809 vtkgdcmSerieViewer.exp
> > > > > > > > 28/01/2008 11:06 207.872 vtkgdcmserieviewer.idb
> > > > > > > > 28/01/2008 11:06 10.838 vtkgdcmSerieViewer.lib
> > > > > > > > 28/01/2008 11:06 27.136 vtkgdcmSerieViewer2.exe
> > > > > > > > 28/01/2008 11:06 5.810 vtkgdcmSerieViewer2.exp
> > > > > > > > 28/01/2008 11:06 199.680 vtkgdcmserieviewer2.idb
> > > > > > > > 28/01/2008 11:06 10.868 vtkgdcmSerieViewer2.lib
> > > > > > > > 28/01/2008 11:06 16.896 vtkgdcmViewer.exe
> > > > > > > > 28/01/2008 11:06 5.798 vtkgdcmViewer.exp
> > > > > > > > 28/01/2008 11:06 191.488 vtkgdcmviewer.idb
> > > > > > > > 28/01/2008 11:06 10.646 vtkgdcmViewer.lib
> > > > > > > > 28/01/2008 11:06 22.016 vtkgdcmViewer2.exe
> > > > > > > > 28/01/2008 11:06 10.693 vtkgdcmViewer2.exp
> > > > > > > > 28/01/2008 11:06 191.488 vtkgdcmviewer2.idb
> > > > > > > > 28/01/2008 11:06 18.934 vtkgdcmViewer2.lib
> > > > > > > > 28/01/2008 11:06 18.432 vtkWriteDicom.exe
> > > > > > > > 28/01/2008 11:06 10.272 vtkWriteDicom.exp
> > > > > > > > 28/01/2008 11:06 166.912 vtkwritedicom.idb
> > > > > > > > 28/01/2008 11:06 18.168 vtkWriteDicom.lib
> > > > > > > > 28/01/2008 11:06 25.088
> vtkWriteDicomExtended.exe
> > > > > > > > 28/01/2008 11:06 10.288
> vtkWriteDicomExtended.exp
> > > > > > > > 28/01/2008 11:06 166.912
> vtkwritedicomextended.idb
> > > > > > > > 28/01/2008 11:06 18.632
> vtkWriteDicomExtended.lib
> > > > > > > > 28/01/2008 11:06 401.408 _gdcm.dll
> > > > > > > > 28/01/2008 11:06 552 _gdcm.exp
> > > > > > > > 28/01/2008 11:06 240.640 _gdcm.idb
> > > > > > > > 28/01/2008 11:06 1.684 _gdcm.lib
> > > > > > > >
> > > > > > > >
> > > > > > > > Thanks,
> > > > > > > > Paulo
> > > > > > > >
> > > > > > > >
> > > > > > > >
> > > > > > > > 2008/1/28, Mathieu Malaterre <mathieu.malaterre at gmail.com>:
> > > > > > > >
> > > > > > > > > Hi Paulo,
> > > > > > > > >
> > > > > > > > > This should be fixed. Please try again with after a cvs
> > update.
> > > > > > > > >
> > > > > > > > > Thanks
> > > > > > > > > -Mathieu
> > > > > > > > >
> > > > > > > > > On Jan 28, 2008 1:16 PM, Paulo Henrique Junqueira Amorim
> > > > > > > > > <paulojamorim at gmail.com> wrote:
> > > > > > > > > > Hi,
> > > > > > > > > >
> > > > > > > > > > I am update my cvs and compile one but showed error, Are
> > anexed
> > > > log
> > > > > > > > > >
> > > > > > > > > > Again compiled vtk and gdcm on VC++ 2005
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > Generated only those files,
> > > > > > > > > >
> > > > > > > > > > 28/01/2008 10:03 19.456 bmp2dcm.idb
> > > > > > > > > > 28/01/2008 10:02 675.840 gdcm.dll
> > > > > > > > > > 28/01/2008 10:02 237.333 gdcm.exp
> > > > > > > > > > 28/01/2008 10:02 510.976 gdcm.idb
> > > > > > > > > > 28/01/2008 10:02 384.830 gdcm.lib
> > > > > > > > > > 28/01/2008 10:02 135.168 gdcmjpeg12.dll
> > > > > > > > > > 28/01/2008 10:02 20.623 gdcmjpeg12.exp
> > > > > > > > > > 28/01/2008 10:02 166.912 gdcmjpeg12.idb
> > > > > > > > > > 28/01/2008 10:02 35.368 gdcmjpeg12.lib
> > > > > > > > > > 28/01/2008 10:02 135.168 gdcmjpeg16.dll
> > > > > > > > > > 28/01/2008 10:02 20.623 gdcmjpeg16.exp
> > > > > > > > > > 28/01/2008 10:02 166.912 gdcmjpeg16.idb
> > > > > > > > > > 28/01/2008 10:02 35.368 gdcmjpeg16.lib
> > > > > > > > > > 28/01/2008 10:02 135.168 gdcmjpeg8.dll
> > > > > > > > > > 28/01/2008 10:02 20.268 gdcmjpeg8.exp
> > > > > > > > > > 28/01/2008 10:02 166.912 gdcmjpeg8.idb
> > > > > > > > > > 28/01/2008 10:02 34.648 gdcmjpeg8.lib
> > > > > > > > > > 28/01/2008 10:02 90.112 gdcmopenjpeg.dll
> > > > > > > > > > 28/01/2008 10:02 2.941 gdcmopenjpeg.exp
> > > > > > > > > > 28/01/2008 10:02 297.984 gdcmopenjpeg.idb
> > > > > > > > > > 28/01/2008 10:02 5.840 gdcmopenjpeg.lib
> > > > > > > > > > 28/01/2008 10:03 147.456 vtkgdcm.dll
> > > > > > > > > > 28/01/2008 10:03 37.104 vtkgdcm.exp
> > > > > > > > > > 28/01/2008 10:03 338.944 vtkgdcm.idb
> > > > > > > > > > 28/01/2008 10:03 61.916 vtkgdcm.lib
> > > > > > > > > > 28/01/2008 10:03 16.896 vtkgdcmdemo.exe
> > > > > > > > > > 28/01/2008 10:03 5.794 vtkgdcmdemo.exp
> > > > > > > > > > 28/01/2008 10:03 216.064 vtkgdcmdemo.idb
> > > > > > > > > > 28/01/2008 10:03 10.496 vtkgdcmdemo.lib
> > > > > > > > > > 28/01/2008 10:03 22.528 vtkgdcmPython.dll
> > > > > > > > > > 28/01/2008 10:03 592 vtkgdcmPython.exp
> > > > > > > > > > 28/01/2008 10:03 412.672 vtkgdcmpython.idb
> > > > > > > > > > 28/01/2008 10:03 1.898 vtkgdcmPython.lib
> > > > > > > > > > 28/01/2008 10:03 27.136
> vtkgdcmSerieViewer.exe
> > > > > > > > > > 28/01/2008 10:03 5.809
> vtkgdcmSerieViewer.exp
> > > > > > > > > > 28/01/2008 10:03 207.872
> vtkgdcmserieviewer.idb
> > > > > > > > > > 28/01/2008 10:03 10.838
> vtkgdcmSerieViewer.lib
> > > > > > > > > > 28/01/2008 10:03 27.136
> vtkgdcmSerieViewer2.exe
> > > > > > > > > > 28/01/2008 10:03 5.810
> vtkgdcmSerieViewer2.exp
> > > > > > > > > > 28/01/2008 10:03 199.680
> vtkgdcmserieviewer2.idb
> > > > > > > > > > 28/01/2008 10:03 10.868
> vtkgdcmSerieViewer2.lib
> > > > > > > > > > 28/01/2008 10:03 16.896 vtkgdcmViewer.exe
> > > > > > > > > > 28/01/2008 10:03 5.798 vtkgdcmViewer.exp
> > > > > > > > > > 28/01/2008 10:03 191.488 vtkgdcmviewer.idb
> > > > > > > > > > 28/01/2008 10:03 10.646 vtkgdcmViewer.lib
> > > > > > > > > > 28/01/2008 10:03 22.016 vtkgdcmViewer2.exe
> > > > > > > > > > 28/01/2008 10:03 10.693 vtkgdcmViewer2.exp
> > > > > > > > > > 28/01/2008 10:03 191.488 vtkgdcmviewer2.idb
> > > > > > > > > > 28/01/2008 10:03 18.934 vtkgdcmViewer2.lib
> > > > > > > > > > 28/01/2008 10:03 18.432 vtkWriteDicom.exe
> > > > > > > > > > 28/01/2008 10:03 10.272 vtkWriteDicom.exp
> > > > > > > > > > 28/01/2008 10:03 166.912 vtkwritedicom.idb
> > > > > > > > > > 28/01/2008 10:03 18.168 vtkWriteDicom.lib
> > > > > > > > > > 28/01/2008 10:03 25.088
> > vtkWriteDicomExtended.exe
> > > > > > > > > > 28/01/2008 10:03 10.288
> > vtkWriteDicomExtended.exp
> > > > > > > > > > 28/01/2008 10:03 166.912
> > vtkwritedicomextended.idb
> > > > > > > > > > 28/01/2008 10:03 18.632
> > vtkWriteDicomExtended.lib
> > > > > > > > > > 28/01/2008 10:03 401.408 _gdcm.dll
> > > > > > > > > > 28/01/2008 10:03 552 _gdcm.exp
> > > > > > > > > > 28/01/2008 10:03 240.640 _gdcm.idb
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > Thanks
> > > > > > > > > > Paulo
> > > > > > > > > >
> > > > > > > > > >
> > > > > > > > > > 2008/1/27, Paulo Henrique Junqueira Amorim
> > > > <paulojamorim at gmail.com>:
> > > > > > > > > >
> > > > > > > > > > > Hi,
> > > > > > > > > > >
> > > > > > > > > > > I will follow their tips and compile again.
> > > > > > > > > > >
> > > > > > > > > > > Thank you,
> > > > > > > > > > > Paulo Amorim
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > >
> > > > > > > > > > > 2008/1/27, Mathieu Malaterre
> > <mathieu.malaterre at gmail.com>:
> > > > > > > > > > > > Congratulation Paulo ! You just found your first bug
> in
> > GDCM
> > > > !
> > > > > > > > > > > >
> > > > > > > > > > > > This is fixed in the current CVS HEAD of GDCM.
> Please
> > update
> > > > > > your
> > > > > > > > > > > > copy, by doing a cvs update.
> > > > > > > > > > > >
> > > > > > > > > > > > Sorry for the troubles,
> > > > > > > > > > > > -Mathieu
> > > > > > > > > > > >
> > > > > > > > > > > > Ref:
> > > > > > > > > > > > $ cvs ci -m"COMP: Fix compilation on Win32 thanks to
> > Paulo
> > > > for
> > > > > > > > report"
> > > > > > > > > > > > Checking in vtkImageColorViewer.h;
> > > > > > > > > > > > /cvs/public/gdcm/vtk/vtkImageColorViewer.h,v <--
> > > > > > > > vtkImageColorViewer.h
> > > > > > > > > > > > new revision: 1.2; previous revision: 1.1
> > > > > > > > > > > > done
> > > > > > > > > > > > Checking in vtkImageMapToWindowLevelColors2.h;
> > > > > > > > > > > >
> /cvs/public/gdcm/vtk/vtkImageMapToWindowLevelColors2.h,v
> > > > <--
> > > > > > > > > > > > vtkImageMapToWindowLevelColors2.h
> > > > > > > > > > > > new revision: 1.2; previous revision: 1.1
> > > > > > > > > > > > done
> > > > > > > > > > > >
> > > > > > > > > > > > On Jan 27, 2008 9:43 PM, Paulo Henrique Junqueira
> Amorim
> > > > > > > > > > > > <paulojamorim at gmail.com> wrote:
> > > > > > > > > > > > > Hi,
> > > > > > > > > > > > >
> > > > > > > > > > > > > I selected to vtk Release.
> > > > > > > > > > > > >
> > > > > > > > > > > > > I am new compile of the gdcm with Release and new
> > error
> > > > > > atached.
> > > > > > > > > > > > >
> > > > > > > > > > > > > Thanks
> > > > > > > > > > > > >
> > > > > > > > > > > > >
> > > > > > > > > > > > >
> > > > > > > > > > > > >
> > > > > > > > > > > > > 2008/1/27, Mathieu Malaterre
> > > > <mathieu.malaterre at gmail.com>:
> > > > > > > > > > > > >
> > > > > > > > > > > > > > Ok so you decided to select: RelWithDebInfo for
> > GDCM.
> > > > What
> > > > > > did
> > > > > > > > you
> > > > > > > > > > > > > > selected for VTK ?
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > On Jan 27, 2008 9:27 PM, Paulo Henrique
> Junqueira
> > Amorim
> > > > > > > > > > > > > > <paulojamorim at gmail.com> wrote:
> > > > > > > > > > > > > > > Hello,
> > > > > > > > > > > > > > >
> > > > > > > > > > > > > > > I am attached file with errors, compile the
> gdcm.
> > > > > > > > > > > > > > >
> > > > > > > > > > > > > > > Thanks
> > > > > > > > > > > > > > > Paulo
> > > > > > > > > > > > > > >
> > > > > > > > > > > > > >
> > > > > > > > > > > > > >
> > > > > > > > > > > > > >
> > > > > > > > > > > > > > --
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