marInterfaceCT Class Reference

#include <marInterfaceCT.h>

Collaboration diagram for marInterfaceCT:

Public Member Functions
	marInterfaceCT ()
	~marInterfaceCT ()
bool	loadParameters (std::string pFile)
bool	saveParameters (std::string pFile)
bool	loadParameters ()
bool	saveParameters ()
bool	initExperiment ()
bool	saveExperiment (std::string nFile)
bool	loadExperiment (std::string nFile)
void	reset ()
void	SetParamFileName (std::string pFileName)
std::string	GetParamFileName ()
void	SetDicom (marFilesBase *dicom)
void	appendAxis (marAxis *ax)
marAxisCT *	getAxis (int i=-1)
void	setAxis (int i)
int	getQuantStart ()
int	getQuantFinish ()
void	prepareQuantification ()
vtkImageData *	getSliceImage (int i)
vtkProbeFilter *	get3DSlice (int i)
double	getTotalLength ()
double	getSubAxisLength ()
double	getReferenceArea ()
double	getReferenceAverDiam ()
double	getAverageArea (int pIni, int pEnd)
int	getNumberOfSlices ()
marContour *	getContour (int point, int contour)
vtkPoints *	get3Dcontour (int point, int contour)
vtkPolyData *	get2Dcontour (int point, int contour)
vtkPoints *	get2DDiameterMin (int point, int contour)
vtkPoints *	get2DDiameterMax (int point, int contour)
marParameters *	getParameters ()
marDynData *	getDynData ()
void	getVOI (int *voi)
void	setVOI (int *voi)
int	getActualQuant ()
int	getHealthySlice ()
int	getHealthySliceStart ()
int	getHealthySliceEnd ()
void	setHealthySlice (int hsS, int hs, int hsE)
void	setActualQuant (int act)
void	replaceContour2D (int i, int size, double vx, double vy)
void	replaceContour2D (int size, double vx, double vy, int type)
void	cleanContours (int type)
void	EraseContour (int i)
void	ClearContours ()
void	RegenerateAxis ()
void	RegenerateSignal ()
void	RecalculateAxis ()
void	ClearContoursPartial (int start)
void	getMinMax (double &min, double &max)
int	getNumberOfContours (int point)
void	updateLumenPercentage (int percentage)
void	updateCalcPercentage (int percentage)
void	updateDiscontinuityThreshold (int percentage)
marIsocontour *	loadMarIsocontour (int size, double vx, double vy)
double	performXOR (int type, std::vector< marIsocontour * > manual)
double	performAND (int type, std::vector< marIsocontour * > manual)
double	performUnion (int type, std::vector< marIsocontour * > manual)
void	histogram (int point)
int	getContourType (int point, int index)
void	setCalibration (bool calib)
bool	getCalibration ()
void	setStartIndex (int start)
int	getPointSize ()
marPoint *	getPoint (int i)
void	markUpLumen (int point)
void	generateFile ()
marExperimentCT *	GetExperiment ()
Public Attributes
marFilesBase *	_dicom
marParameters *	_parameters
Protected Attributes
std::string	m_paramFileName
Private Attributes
marExperimentCT *	_experiment

Detailed Description

Definition at line 30 of file marInterfaceCT.h.

Constructor & Destructor Documentation

marInterfaceCT::marInterfaceCT ( )

Definition at line 29 of file marInterfaceCT.cpp.

References _experiment, _parameters, m_paramFileName, and MAR_DEFAULT_FILE_PARAMETERS.

00030 : _parameters( NULL ), _dicom( NULL ),
00031 _experiment( NULL )
00032 {
00033         m_paramFileName=MAR_DEFAULT_FILE_PARAMETERS;
00034     _parameters = new marParameters( );
00035 
00036     _experiment = new marExperimentCT( _parameters );
00037         
00038     
00039 }

marInterfaceCT::~marInterfaceCT ( )

Definition at line 42 of file marInterfaceCT.cpp.

References reset().

00042                                 {
00043     reset( );
00044 }

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Member Function Documentation

void marInterfaceCT::appendAxis ( marAxis * ax )

Definition at line 210 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::appendAxis().

Referenced by wxProcessingCTWidget::OnExtract().

00211 {
00212     _experiment->appendAxis(ax);
00213 }

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void marInterfaceCT::cleanContours ( int type )

Definition at line 476 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::cleanContours().

Referenced by wxQuantificationWidgetCT::OnReplaceContourCalc(), wxQuantificationWidgetCT::OnReplaceContourLumen(), and wxQuantificationWidgetCT::OnReplaceContourWall().

00477 {
00478         _experiment->cleanContours(type);
00479 }

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void marInterfaceCT::ClearContours ( )

Definition at line 335 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::ClearContours().

Referenced by wxMaracasQuantificationCT::CleanContours().

00335                                    {
00336         _experiment->ClearContours();
00337 }

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void marInterfaceCT::ClearContoursPartial ( int start )

Definition at line 440 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::ClearContoursPartial().

Referenced by wxQuantificationWidgetCT::OnCalibration().

00441 {
00442         _experiment->ClearContoursPartial(start);
00443 }

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void marInterfaceCT::EraseContour ( int i )

Definition at line 330 of file marInterfaceCT.cpp.

References _experiment, marAxis::EraseContour(), and marExperiment::getAxis().

Referenced by wxQuantificationWidgetCT::SetManualContour_AddPoint_2DWorld().

00330                                          {
00331         _experiment->getAxis()->EraseContour( i );
00332 }

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void marInterfaceCT::generateFile ( )

Definition at line 470 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::generateFile().

Referenced by wxQuantificationWidgetCT::OnFile().

00471 {
00472         _experiment->generateFile();
00473 }

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vtkPolyData * marInterfaceCT::get2Dcontour	(	int	point,
		int	contour
	)

Definition at line 370 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::get2Dcontour().

Referenced by wxQuantificationWidgetCT::RefreshAxis().

00370                                                                   {
00371         return _experiment->get2Dcontour(point,contour);
00372 }

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vtkPoints * marInterfaceCT::get2DDiameterMax	(	int	point,
		int	contour
	)

Definition at line 380 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::get2DDiameterMax().

00380                                                                     {
00381         return _experiment->get2DDiameterMax(point,contour);
00382 }

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vtkPoints * marInterfaceCT::get2DDiameterMin	(	int	point,
		int	contour
	)

Definition at line 375 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::get2DDiameterMin().

00375                                                                     {
00376         return _experiment->get2DDiameterMin(point,contour);
00377 }

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vtkPoints * marInterfaceCT::get3Dcontour	(	int	point,
		int	contour
	)

Definition at line 365 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::get3Dcontour().

Referenced by wxQuantificationWidgetCT::OnContour_BT().

00365                                                                      {
00366         return _experiment->get3Dcontour(point,contour);
00367 }

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vtkProbeFilter * marInterfaceCT::get3DSlice ( int i )

Definition at line 249 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::get3DSlice().

Referenced by wxQuantificationWidgetCT::RefreshAxis(), and vtk3DQuantSurfaceWidget::ShowMARACASDataAndAxeCT().

00249                                                   {
00250         return _experiment->get3DSlice( i );
00251 }

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int marInterfaceCT::getActualQuant ( )

Definition at line 284 of file marInterfaceCT.cpp.

References _experiment, marAxis::getActualQuant(), and marExperiment::getAxis().

00284                                     {
00285         return _experiment->getAxis()->getActualQuant();
00286 }

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double marInterfaceCT::getAverageArea	(	int	pIni,
		int	pEnd
	)

Definition at line 274 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getAverageArea().

00274                                                         {
00275         return _experiment->getAverageArea(pIni,pEnd);
00276 }

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marAxisCT * marInterfaceCT::getAxis ( int i = -1 )

Definition at line 217 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getAxis().

Referenced by wxQuantificationWidgetCT::AddAxisActors(), wxQuantificationWidgetCT::CallBackOnLeftDClick(), and vtk3DQuantSurfaceWidget::ShowMARACASDataAndAxeCT().

00217                                           {
00218         return (marAxisCT *) _experiment->getAxis(i);
00219 }

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bool marInterfaceCT::getCalibration ( )

Definition at line 434 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getCalibration().

00435 {
00436         return _experiment->getCalibration();
00437 }

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marContour * marInterfaceCT::getContour	(	int	point,
		int	contour
	)

Definition at line 360 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getContour().

Referenced by wxQuantificationWidgetCT::GetStenosisArea(), and wxQuantificationWidgetCT::GetStenosisDiameter().

00360                                                                {
00361         return _experiment->getContour(point,contour);
00362 }

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int marInterfaceCT::getContourType	(	int	point,
		int	index
	)

Definition at line 416 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getContourType().

Referenced by wxQuantificationWidgetCT::RefreshAxis().

00417 {
00418         return _experiment->getContourType(point,index);
00419 }

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marDynData * marInterfaceCT::getDynData ( )

Definition at line 389 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getDynData().

Referenced by wxQuantificationWidgetCT::MoveSlider(), and vtk3DSurfaceWidget::ShowMARACASDataCT().

00389                                       {
00390         return  _experiment->getDynData();
00391 }

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marExperimentCT * marInterfaceCT::GetExperiment ( )

Definition at line 289 of file marInterfaceCT.cpp.

References _experiment.

Referenced by wxQuantificationWidgetCT::MoveSlider(), and vtk3DSurfaceWidget::ShowMARACASDataCT().

00290 {
00291         return _experiment;
00292 }

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int marInterfaceCT::getHealthySlice ( )

Definition at line 295 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::getHealthySlice().

Referenced by wxQuantificationWidgetCT::GetHealthySlice(), wxQuantificationWidgetCT::OnHealthySlice_CB(), and wxQuantificationWidgetCT::showVariables().

00295                                      {
00296         return _experiment->getAxis( )->getHealthySlice( );
00297 }

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int marInterfaceCT::getHealthySliceEnd ( )

Definition at line 305 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::getHealthySliceEnd().

Referenced by wxQuantificationWidgetCT::GetHealthySliceRange(), and wxQuantificationWidgetCT::showVariables().

00305                                         {
00306         return _experiment->getAxis()->getHealthySliceEnd( );
00307 }

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int marInterfaceCT::getHealthySliceStart ( )

Definition at line 300 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::getHealthySliceStart().

Referenced by wxQuantificationWidgetCT::GetHealthySliceRange(), and wxQuantificationWidgetCT::showVariables().

00300                                           {
00301         return _experiment->getAxis()->getHealthySliceStart( );
00302 }

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void marInterfaceCT::getMinMax	(	double &	min,
		double &	max
	)

Definition at line 355 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getDynData(), and marDynData::getVolume().

Referenced by wxQuantificationWidgetCT::ShowMARACASData().

00355                                                          {
00356         _experiment->getDynData( )->getVolume( )->getMinMax( min, max );
00357 }

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int marInterfaceCT::getNumberOfContours ( int point )

Definition at line 394 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getNumberOfContours().

Referenced by wxQuantificationWidgetCT::RefreshAxis().

00394                                                  {
00395         return _experiment->getNumberOfContours(point);
00396 }

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int marInterfaceCT::getNumberOfSlices ( )

Definition at line 279 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getNumberOfSlices().

Referenced by wxQuantificationWidgetCT::Clean3D(), wxQuantificationWidgetCT::CreateManualContours(), wxQuantificationWidgetCT::OnCleanAll_BT(), wxProcessingCTWidget::OnExtract(), wxQuantificationWidgetCT::Reset_sl_Slider(), wxQuantificationWidgetCT::ShowMARACASData(), and vtk3DQuantSurfaceWidget::ShowMARACASDataAndAxeCT().

00279                                        {
00280         return _experiment->getNumberOfSlices( );
00281 }

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marParameters * marInterfaceCT::getParameters ( )

Definition at line 385 of file marInterfaceCT.cpp.

References _parameters.

Referenced by wxProcessingCTWidget::OnExtract().

00385                                             {
00386         return _parameters;
00387 }

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std::string marInterfaceCT::GetParamFileName ( )

Definition at line 201 of file marInterfaceCT.cpp.

References m_paramFileName.

00201                                             { 
00202         return m_paramFileName;  
00203 }

marPoint * marInterfaceCT::getPoint ( int i )

Definition at line 458 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getPoint().

Referenced by wxQuantificationWidgetCT::RefreshAxis().

00459 {
00460         return _experiment->getPoint(i);
00461 }

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int marInterfaceCT::getPointSize ( )

Definition at line 452 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::getPointSize().

Referenced by wxQuantificationWidgetCT::RefreshAxis().

00453 {
00454         return _experiment->getPointSize();
00455 }

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int marInterfaceCT::getQuantFinish ( )

Definition at line 233 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getQuantFinish().

Referenced by wxQuantificationWidgetCT::showVariables().

00233                                     {
00234         return _experiment->getQuantFinish( );
00235 }

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int marInterfaceCT::getQuantStart ( )

Definition at line 228 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getQuantStart().

Referenced by wxQuantificationWidgetCT::showVariables().

00228                                    {
00229         return _experiment->getQuantStart( );
00230 }

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double marInterfaceCT::getReferenceArea ( )

Definition at line 264 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getReferenceArea().

Referenced by wxQuantificationWidgetCT::GetStenosisArea(), and wxQuantificationWidgetCT::showVariables().

00264                                          {
00265                 return _experiment->getReferenceArea( );
00266 }

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double marInterfaceCT::getReferenceAverDiam ( )

Definition at line 269 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getReferenceAverDiam().

Referenced by wxQuantificationWidgetCT::GetStenosisDiameter(), and wxQuantificationWidgetCT::showVariables().

00269                                              {
00270         return _experiment->getReferenceAverDiam( );
00271 }

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vtkImageData * marInterfaceCT::getSliceImage ( int i )

Definition at line 244 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getSliceImage().

Referenced by wxQuantificationWidgetCT::GetVolumeAxisExtended(), wxQuantificationWidgetCT::RefreshAxis(), and wxQuantificationWidgetCT::ShowMARACASData().

00244                                                    {
00245         return _experiment->getSliceImage( i );
00246 }

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double marInterfaceCT::getSubAxisLength ( )

Definition at line 259 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getSubAxisLength().

Referenced by wxQuantificationWidgetCT::showVariables().

00259                                          {
00260         return _experiment->getSubAxisLength( );
00261 }

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double marInterfaceCT::getTotalLength ( )

Definition at line 254 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::getTotalLength().

00254                                        {
00255         return _experiment->getTotalLength( );
00256 }

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void marInterfaceCT::getVOI ( int * voi ) [inline]

Definition at line 84 of file marInterfaceCT.h.

00084 { _experiment->getVOI(voi); };

void marInterfaceCT::histogram ( int point )

Definition at line 422 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::histogram().

00423 {
00424         _experiment->histogram(point);
00425 }

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bool marInterfaceCT::initExperiment ( )

Definition at line 119 of file marInterfaceCT.cpp.

References _dicom, _experiment, marFilesBase::getVolume(), marExperiment::initExperiment(), and marExperiment::reset().

00120 {
00121     _experiment->reset( );
00122     _experiment->initExperiment( _dicom->getVolume( ) );
00123     return( true );
00124         
00125 }

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bool marInterfaceCT::loadExperiment ( std::string nFile )

Definition at line 156 of file marInterfaceCT.cpp.

References _dicom, _experiment, _parameters, marExperiment::load(), marObject::load(), marParameters::load(), marExperiment::reset(), marObject::reset(), and marParameters::reset().

00158 00159 00160 00161 00162 00163 00164 00165 00166 00167 00168 00169 00170 00171 00172 00173 00174 00175 00176 00177 00178 00179 00180 00181 00182 00183 00184 00185 }

class="fragment">00157 { std::ifstream is( nFile.c_str( ) ,std::ios::binary|std::ios::in ); //EEDxx2.4 DEBuG // wxLogDebug(wxString("Loading experiment from file ") // + wxString(nFile.c_str())); wxString errorMsg; errorMsg= wxString(_T("Cannot open file ")) + wxString((wxChar*)nFile.c_str(), wxConvUTF8) + wxString(_T(" to load experiment")); if( is !=NULL) { _parameters->reset( ); _dicom->reset( ); _experiment->reset( ); _parameters->load( is ); _dicom->load( is ); _experiment->load( is ); is.close( ); return( true ); } // fi //EEDxx2.4 DEBuG // wxLogDebug(errorMsg); return( false );

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marIsocontour * marInterfaceCT::loadMarIsocontour	(	int	size,
		double *	vx,
		double *	vy
	)

Definition at line 482 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::loadMarIsocontour().

Referenced by wxQuantificationWidgetCT::performAND(), and wxQuantificationWidgetCT::performXOR().

00483 {
00484         return _experiment->loadMarIsocontour(size,vx,vy);
00485 }

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bool marInterfaceCT::loadParameters ( ) [inline]

Definition at line 40 of file marInterfaceCT.h.

References loadParameters().

Referenced by loadParameters().

00040 {return loadParameters(m_paramFileName);}

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bool marInterfaceCT::loadParameters ( std::string pFile )

Definition at line 47 of file marInterfaceCT.cpp.

References _parameters, marParameters::load(), and marParameters::reset().

00048 {
00049         std::ifstream is( pFile.c_str( ),std::ios::binary|std::ios::in);
00050 
00051 //EEDxx2.4 DEBuG
00052 //      wxLogDebug(wxString("Loading parameters from file ") 
00053 //              + wxString(pFile.c_str()));
00054         
00055         if( is==NULL )
00056         {
00057                 wxString errorMsg;
00058                 errorMsg= wxString(_T("Error : Cannot open file "))
00059                                 + wxString((wxChar*)pFile.c_str(), wxConvUTF8)
00060                                 + wxString(_T(" to load parameters"));
00061 //EEDxx2.4 DEBuG
00062 //              wxLogDebug(errorMsg);
00063                 return (false);
00064         }
00065         _parameters->reset( );
00066         if (_parameters->load( is ))
00067         {
00068                 is.close( );
00069                 return( true );
00070         }
00071         else
00072         {
00073                 is.close();
00074 //EEDxx2.4 DEBuG
00075 //              wxLogDebug(wxString("Error : Cannot load parameters from file ")
00076 //                              + wxString(pFile.c_str())
00077 //                              + wxString(": file may be corrupted"));
00078                 return (false);
00079         }
00080 }

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void marInterfaceCT::markUpLumen ( int point )

Definition at line 464 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::markUpLumen().

Referenced by wxQuantificationWidgetCT::OnCalibration().

00465 {
00466         _experiment->markUpLumen(point);
00467 }

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double marInterfaceCT::performAND	(	int	type,
		std::vector< marIsocontour * >	manual
	)

Definition at line 494 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::performAND().

Referenced by wxQuantificationWidgetCT::performXOR().

00495 {
00496         return _experiment->performAND(type, manual);
00497 }

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double marInterfaceCT::performUnion	(	int	type,
		std::vector< marIsocontour * >	manual
	)

Definition at line 500 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::performUnion().

Referenced by wxQuantificationWidgetCT::performXOR().

00501 {
00502         return _experiment->performUnion(type, manual);
00503 }

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double marInterfaceCT::performXOR	(	int	type,
		std::vector< marIsocontour * >	manual
	)

Definition at line 488 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::performXOR().

Referenced by wxQuantificationWidgetCT::performXOR().

00489 {
00490         return _experiment->performXOR(type, manual);
00491 }

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void marInterfaceCT::prepareQuantification ( )

Definition at line 238 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::prepareQuantification().

Referenced by wxProcessingCTWidget::OnExtract(), and wxQuantificationWidgetCT::ShowMARACASData().

00238                                             {
00239         _experiment->prepareQuantification( );
00240 }

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void marInterfaceCT::RecalculateAxis ( )

Definition at line 350 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::RegenerateAxis().

Referenced by wxMaracasQuantificationCT::RegenerateAll().

00350                                      {
00351         _experiment->RegenerateAxis();
00352 }

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void marInterfaceCT::RegenerateAxis ( )

Definition at line 340 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::RegenerateAxis().

Referenced by wxMaracasQuantificationCT::RegenerateAll().

00340                                     {
00341         _experiment->RegenerateAxis();
00342 }

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void marInterfaceCT::RegenerateSignal ( )

Definition at line 345 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::RegenerateSignal().

Referenced by wxMaracasQuantificationCT::RegenerateSignal().

00345                                       {
00346         _experiment->RegenerateSignal();
00347 }

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void marInterfaceCT::replaceContour2D	(	int	size,
		double *	vx,
		double *	vy,
		int	type
	)

Definition at line 324 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::replaceContour2D().

00325 {
00326         _experiment->replaceContour2D(size,vx,vy,type);
00327 }

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void marInterfaceCT::replaceContour2D	(	int	i,
		int	size,
		double *	vx,
		double *	vy
	)

Definition at line 320 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::replaceContour2D().

Referenced by wxQuantificationWidgetCT::OnReplaceContourCalc(), wxQuantificationWidgetCT::OnReplaceContourLumen(), and wxQuantificationWidgetCT::OnReplaceContourWall().

00320                                                                           {
00321         _experiment->getAxis()->replaceContour2D(i,size,vx,vy);
00322 }

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void marInterfaceCT::reset ( )

Definition at line 188 of file marInterfaceCT.cpp.

References _dicom, _experiment, and _parameters.

Referenced by ~marInterfaceCT().

00188                            {
00189     if( _experiment != NULL ) delete _experiment;
00190     if( _dicom != NULL ) delete _dicom;
00191     if( _parameters != NULL ) delete _parameters;
00192     _experiment = NULL;
00193     _dicom = NULL;
00194     _parameters = NULL;
00195 }

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bool marInterfaceCT::saveExperiment ( std::string nFile )

Definition at line 127 of file marInterfaceCT.cpp.

References _dicom, _experiment, _parameters, marExperiment::save(), marObject::save(), and marParameters::save().

00128 {
00129         std::ofstream os( nFile.c_str( ),std::ios::binary | std::ios::out );
00130         
00131 //EEDxx2.4 DEBuG
00132 //      wxLogDebug(wxString("Saving experiment to file ") 
00133 //                      + wxString(nFile.c_str()));
00134         
00135         wxString errorMsg;
00136         errorMsg= wxString(_T("Cannot open file "))
00137                         + wxString((wxChar*)nFile.c_str(), wxConvUTF8)
00138                         + wxString(_T(" to save experiment"));
00139 
00140         
00141     if( os !=NULL ) {
00142                 
00143         _parameters->save( os );
00144         _dicom->save( os );
00145         _experiment->save( os );
00146                 os.close( );
00147                 return( true );
00148                 
00149     } // fi
00150 //EEDxx2.4 DEBuG
00151 //      wxLogDebug(errorMsg);
00152     return( false );
00153 }

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bool marInterfaceCT::saveParameters ( ) [inline]

Definition at line 41 of file marInterfaceCT.h.

References saveParameters().

Referenced by saveParameters().

00041 {return saveParameters(m_paramFileName);}

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bool marInterfaceCT::saveParameters ( std::string pFile )

Definition at line 83 of file marInterfaceCT.cpp.

References _parameters, and marParameters::save().

00084 {
00085         std::ofstream os(pFile.c_str( ),std::ios::binary | std::ios::out);
00086         
00087 //EEDxx2.4 DEBuG
00088 //      wxLogDebug(wxString("Saving parameters to file ") 
00089 //                      + wxString(pFile.c_str()));
00090         
00091         
00092         if( os==NULL )
00093         {
00094                 wxString errorMsg;
00095                 errorMsg= wxString(_T("Error : Cannot open file "))
00096                                 + wxString( (wxChar*)pFile.c_str(), wxConvUTF8)
00097                                 + wxString(_T(" to save parameters"));
00098 //EEDxx2.4 DEBuG
00099 //              wxLogDebug(errorMsg);
00100                 return( false );
00101         }
00102         if(_parameters->save( os ))
00103         {
00104                 os.close( );
00105                 return( true );
00106         }
00107         else
00108         {
00109                 os.close();
00110 //EEDxx2.4 DEBuG
00111 //              wxLogDebug(wxString("Error : Cannot save parameters to file ")
00112 //                              + wxString(pFile.c_str()));
00113                 return (false);
00114         }
00115 
00116 }

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void marInterfaceCT::setActualQuant ( int act )

Definition at line 315 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::setActualQuant().

Referenced by wxQuantificationWidgetCT::MoveSlider(), wxQuantificationWidgetCT::ResetAxis(), and wxQuantificationWidgetCT::ShowMARACASData().

00315                                            {
00316         _experiment->getAxis()->setActualQuant( act ) ;
00317 }

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void marInterfaceCT::setAxis ( int i )

Definition at line 222 of file marInterfaceCT.cpp.

References _experiment, and marExperiment::setAxis().

Referenced by wxProcessingCTWidget::OnExtract(), and vtk3DQuantSurfaceWidget::ShowMARACASDataAndAxeCT().

00223 {
00224    _experiment->setAxis(i);
00225 }

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void marInterfaceCT::setCalibration ( bool calib )

Definition at line 428 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::setCalibration().

Referenced by wxQuantificationWidgetCT::OnCalibration().

00429 {
00430         _experiment->setCalibration(calib);
00431 }

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void marInterfaceCT::SetDicom ( marFilesBase * dicom )

Definition at line 205 of file marInterfaceCT.cpp.

References _dicom.

00205                                                  {
00206         _dicom=dicom;                            
00207 }

void marInterfaceCT::setHealthySlice	(	int	hsS,
		int	hs,
		int	hsE
	)

Definition at line 310 of file marInterfaceCT.cpp.

References _experiment, marExperiment::getAxis(), and marAxis::setHealthySlice().

Referenced by wxQuantificationWidgetCT::ResetAxis().

00310                                                                {
00311         _experiment->getAxis()->setHealthySlice(hsS,hs,hsE);
00312         
00313 }

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void marInterfaceCT::SetParamFileName ( std::string pFileName )

Definition at line 197 of file marInterfaceCT.cpp.

References m_paramFileName.

00197                                                          { 
00198         m_paramFileName=pFileName; 
00199 }

void marInterfaceCT::setStartIndex ( int start )

Definition at line 446 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::setStartIndex().

Referenced by wxQuantificationWidgetCT::OnCalibration().

00447 {
00448         _experiment->setStartIndex(start);
00449 }

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void marInterfaceCT::setVOI ( int * voi ) [inline]

Definition at line 85 of file marInterfaceCT.h.

00085 { _experiment->setVOI(voi); };

void marInterfaceCT::updateCalcPercentage ( int percentage )

Definition at line 405 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::updateCalcPercentage().

Referenced by wxQuantificationWidgetCT::OnSliderCalcPercentageScroll().

00405                                                         {
00406         _experiment->updateCalcPercentage(percentage);
00407 }

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void marInterfaceCT::updateDiscontinuityThreshold ( int percentage )

Definition at line 410 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::updateDiscontinuityThreshold().

Referenced by wxQuantificationWidgetCT::OnSliderDiscontinuityScroll().

00410                                                                 {
00411         _experiment->updateDiscontinuityThreshold(percentage);
00412         //TODO HACER RESET DEL CONTORNO
00413 }

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void marInterfaceCT::updateLumenPercentage ( int percentage )

Definition at line 400 of file marInterfaceCT.cpp.

References _experiment, and marExperimentCT::updateLumenPercentage().

Referenced by wxQuantificationWidgetCT::OnSliderLumenPercentageScroll().

00400                                                          {
00401         _experiment->updateLumenPercentage(percentage);
00402 }

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Member Data Documentation

marFilesBase* marInterfaceCT::_dicom

Definition at line 134 of file marInterfaceCT.h.

Referenced by initExperiment(), loadExperiment(), reset(), saveExperiment(), and SetDicom().

marExperimentCT* marInterfaceCT::_experiment [private]

Definition at line 142 of file marInterfaceCT.h.

Referenced by appendAxis(), cleanContours(), ClearContours(), ClearContoursPartial(), EraseContour(), generateFile(), get2Dcontour(), get2DDiameterMax(), get2DDiameterMin(), get3Dcontour(), get3DSlice(), getActualQuant(), getAverageArea(), getAxis(), getCalibration(), getContour(), getContourType(), getDynData(), GetExperiment(), getHealthySlice(), getHealthySliceEnd(), getHealthySliceStart(), getMinMax(), getNumberOfContours(), getNumberOfSlices(), getPoint(), getPointSize(), getQuantFinish(), getQuantStart(), getReferenceArea(), getReferenceAverDiam(), getSliceImage(), getSubAxisLength(), getTotalLength(), histogram(), initExperiment(), loadExperiment(), loadMarIsocontour(), marInterfaceCT(), markUpLumen(), performAND(), performUnion(), performXOR(), prepareQuantification(), RecalculateAxis(), RegenerateAxis(), RegenerateSignal(), replaceContour2D(), reset(), saveExperiment(), setActualQuant(), setAxis(), setCalibration(), setHealthySlice(), setStartIndex(), updateCalcPercentage(), updateDiscontinuityThreshold(), and updateLumenPercentage().

marParameters* marInterfaceCT::_parameters

Definition at line 135 of file marInterfaceCT.h.

Referenced by getParameters(), loadExperiment(), loadParameters(), marInterfaceCT(), reset(), saveExperiment(), and saveParameters().

std::string marInterfaceCT::m_paramFileName [protected]

Definition at line 139 of file marInterfaceCT.h.

Referenced by GetParamFileName(), marInterfaceCT(), and SetParamFileName().

The documentation for this class was generated from the following files:

/home/davila/Creatis/creaMaracasVisu/lib/maracasVisuLib/src/kernel/include/marInterfaceCT.h
/home/davila/Creatis/creaMaracasVisu/lib/maracasVisuLib/src/kernel/include/marInterfaceCT.cpp

marInterfaceCT Class Reference

Public Member Functions

Public Attributes

Protected Attributes

Private Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation